Gene : Phvul.001G148200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23115//PTHR23115:SF155 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  1457
Name:  ? Phvul.001G148200 Secondary Identifier:  ? PAC:37168225
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G148200 0.5kb upstream 0.5kb upstream 4695 true Chr01: 39521942-39526636 Phaseolus vulgaris
Phvul.001G148200 0.5kb upstream 0.5kb upstream 500 false Chr01: 39521942-39522441 Phaseolus vulgaris
Phvul.001G148200 0.5kb downstream 0.5kb downstream 4695 true Chr01: 39522442-39527136 Phaseolus vulgaris
Phvul.001G148200 0.5kb downstream 0.5kb downstream 500 false Chr01: 39526637-39527136 Phaseolus vulgaris
Phvul.001G148200 1.0kb upstream 1.0kb upstream 5195 true Chr01: 39521442-39526636 Phaseolus vulgaris
Phvul.001G148200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39521442-39522441 Phaseolus vulgaris
Phvul.001G148200 1.0kb downstream 1.0kb downstream 5195 true Chr01: 39522442-39527636 Phaseolus vulgaris
Phvul.001G148200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39526637-39527636 Phaseolus vulgaris
Phvul.001G148200 2.0kb upstream 2.0kb upstream 6195 true Chr01: 39520442-39526636 Phaseolus vulgaris
Phvul.001G148200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39520442-39522441 Phaseolus vulgaris
Phvul.001G148200 2.0kb downstream 2.0kb downstream 6195 true Chr01: 39522442-39528636 Phaseolus vulgaris
Phvul.001G148200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39526637-39528636 Phaseolus vulgaris
Phvul.001G148200 5.0kb upstream 5.0kb upstream 9195 true Chr01: 39517442-39526636 Phaseolus vulgaris
Phvul.001G148200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39517442-39522441 Phaseolus vulgaris
Phvul.001G148200 5.0kb downstream 5.0kb downstream 9195 true Chr01: 39522442-39531636 Phaseolus vulgaris
Phvul.001G148200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39526637-39531636 Phaseolus vulgaris
Phvul.001G148200 10.0kb upstream 10.0kb upstream 14195 true Chr01: 39512442-39526636 Phaseolus vulgaris
Phvul.001G148200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39512442-39522441 Phaseolus vulgaris
Phvul.001G148200 10.0kb downstream 10.0kb downstream 14195 true Chr01: 39522442-39536636 Phaseolus vulgaris
Phvul.001G148200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39526637-39536636 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301403 5265 Fabidae View MSA
124064307 5270 Rosid View MSA
123739594 5271 Pentapetalae View MSA
122788926 5272 Eudicot View MSA
122047796 5273 Angiosperm View MSA
121347334 5274 Embryophyte View MSA
123424775 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.1156 0.0 78.2609    
cufflinks 53.1285 0.0 142.57 High High
cufflinks 17.9071 0.0 46.3542   Low
cufflinks 57.2905 0.0 154.314 High High
cufflinks 34.0005 0.0 88.5591 High  
cufflinks 14.5544 0.0 37.8806   Low
cufflinks 29.2472 0.0 75.949 High  
cufflinks 41.8853 0.0 110.548 High  
cufflinks 43.8767 0.0 116.099 High  
cufflinks 40.3846 0.0 106.211 High  
cufflinks 32.5816 0.0 84.7755    

0 Strain