Gene : Phvul.001G131600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR34960:SF1 - EMB Genomic Order:  1283
Name:  ? Phvul.001G131600 Secondary Identifier:  ? PAC:37170881
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G131600 0.5kb upstream 0.5kb upstream 2534 true Chr01: 36571397-36573930 Phaseolus vulgaris
Phvul.001G131600 0.5kb upstream 0.5kb upstream 500 false Chr01: 36571397-36571896 Phaseolus vulgaris
Phvul.001G131600 0.5kb downstream 0.5kb downstream 2534 true Chr01: 36571897-36574430 Phaseolus vulgaris
Phvul.001G131600 0.5kb downstream 0.5kb downstream 500 false Chr01: 36573931-36574430 Phaseolus vulgaris
Phvul.001G131600 1.0kb upstream 1.0kb upstream 3034 true Chr01: 36570897-36573930 Phaseolus vulgaris
Phvul.001G131600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36570897-36571896 Phaseolus vulgaris
Phvul.001G131600 1.0kb downstream 1.0kb downstream 3034 true Chr01: 36571897-36574930 Phaseolus vulgaris
Phvul.001G131600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36573931-36574930 Phaseolus vulgaris
Phvul.001G131600 2.0kb upstream 2.0kb upstream 4034 true Chr01: 36569897-36573930 Phaseolus vulgaris
Phvul.001G131600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36569897-36571896 Phaseolus vulgaris
Phvul.001G131600 2.0kb downstream 2.0kb downstream 4034 true Chr01: 36571897-36575930 Phaseolus vulgaris
Phvul.001G131600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36573931-36575930 Phaseolus vulgaris
Phvul.001G131600 5.0kb upstream 5.0kb upstream 7034 true Chr01: 36566897-36573930 Phaseolus vulgaris
Phvul.001G131600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36566897-36571896 Phaseolus vulgaris
Phvul.001G131600 5.0kb downstream 5.0kb downstream 7034 true Chr01: 36571897-36578930 Phaseolus vulgaris
Phvul.001G131600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36573931-36578930 Phaseolus vulgaris
Phvul.001G131600 10.0kb upstream 10.0kb upstream 12034 true Chr01: 36561897-36573930 Phaseolus vulgaris
Phvul.001G131600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36561897-36571896 Phaseolus vulgaris
Phvul.001G131600 10.0kb downstream 10.0kb downstream 12034 true Chr01: 36571897-36583930 Phaseolus vulgaris
Phvul.001G131600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36573931-36583930 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311939 5265 Fabidae View MSA
124063273 5270 Rosid View MSA
123749138 5271 Pentapetalae View MSA
122786545 5272 Eudicot View MSA
122045001 5273 Angiosperm View MSA
121350559 5274 Embryophyte View MSA
123381791 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0795 0.0 9.4865   Low
cufflinks 28.0381 0.0 72.5011    
cufflinks 17.6772 0.0 46.4006    
cufflinks 17.0994 0.0 44.5161    
cufflinks 13.5802 0.0 35.9744    
cufflinks 42.3999 0.0 110.101 High High
cufflinks 16.597 0.0 43.4038    
cufflinks 10.8818 0.0 29.4751    
cufflinks 12.5007 0.0 33.2367    
cufflinks 6.45062 0.0 18.329   Low
cufflinks 21.5128 0.0 55.8017    

0 Strain