Gene : Phvul.001G134700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR34267:SF1 - AT0ZI1 PROTEIN Genomic Order:  1318
Name:  ? Phvul.001G134700 Secondary Identifier:  ? PAC:37170362
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G134700 0.5kb upstream 0.5kb upstream 2499 true Chr01: 37303160-37305658 Phaseolus vulgaris
Phvul.001G134700 0.5kb upstream 0.5kb upstream 500 false Chr01: 37305159-37305658 Phaseolus vulgaris
Phvul.001G134700 0.5kb downstream 0.5kb downstream 2499 true Chr01: 37302660-37305158 Phaseolus vulgaris
Phvul.001G134700 0.5kb downstream 0.5kb downstream 500 false Chr01: 37302660-37303159 Phaseolus vulgaris
Phvul.001G134700 1.0kb upstream 1.0kb upstream 2999 true Chr01: 37303160-37306158 Phaseolus vulgaris
Phvul.001G134700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37305159-37306158 Phaseolus vulgaris
Phvul.001G134700 1.0kb downstream 1.0kb downstream 2999 true Chr01: 37302160-37305158 Phaseolus vulgaris
Phvul.001G134700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37302160-37303159 Phaseolus vulgaris
Phvul.001G134700 2.0kb upstream 2.0kb upstream 3999 true Chr01: 37303160-37307158 Phaseolus vulgaris
Phvul.001G134700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37305159-37307158 Phaseolus vulgaris
Phvul.001G134700 2.0kb downstream 2.0kb downstream 3999 true Chr01: 37301160-37305158 Phaseolus vulgaris
Phvul.001G134700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37301160-37303159 Phaseolus vulgaris
Phvul.001G134700 5.0kb upstream 5.0kb upstream 6999 true Chr01: 37303160-37310158 Phaseolus vulgaris
Phvul.001G134700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37305159-37310158 Phaseolus vulgaris
Phvul.001G134700 5.0kb downstream 5.0kb downstream 6999 true Chr01: 37298160-37305158 Phaseolus vulgaris
Phvul.001G134700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37298160-37303159 Phaseolus vulgaris
Phvul.001G134700 10.0kb upstream 10.0kb upstream 11999 true Chr01: 37303160-37315158 Phaseolus vulgaris
Phvul.001G134700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37305159-37315158 Phaseolus vulgaris
Phvul.001G134700 10.0kb downstream 10.0kb downstream 11999 true Chr01: 37293160-37305158 Phaseolus vulgaris
Phvul.001G134700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37293160-37303159 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314331 5265 Fabidae View MSA
124073566 5270 Rosid View MSA
123737481 5271 Pentapetalae View MSA
122795040 5272 Eudicot View MSA
122051261 5273 Angiosperm View MSA
121351565 5274 Embryophyte View MSA
123382229 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.8506 0.0 151.663 High  
cufflinks 38.5493 0.0 125.616 High  
cufflinks 29.777 0.0 99.0823    
cufflinks 103.17 0.0 312.109 High High
cufflinks 41.196 0.0 131.356 High  
cufflinks 23.311 0.0 75.0812   Low
cufflinks 28.0124 0.0 95.6278 High  
cufflinks 36.3523 0.0 116.778 High  
cufflinks 46.9613 0.0 147.944 High  
cufflinks 17.9682 0.0 67.0475   Low
cufflinks 40.7466 0.0 129.293 High  

0 Strain