Gene : Phvul.001G137000 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  1342
Name:  ? Phvul.001G137000 Secondary Identifier:  ? PAC:37170776
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G137000 0.5kb upstream 0.5kb upstream 7737 true Chr01: 37727447-37735183 Phaseolus vulgaris
Phvul.001G137000 0.5kb upstream 0.5kb upstream 500 false Chr01: 37734684-37735183 Phaseolus vulgaris
Phvul.001G137000 0.5kb downstream 0.5kb downstream 7737 true Chr01: 37726947-37734683 Phaseolus vulgaris
Phvul.001G137000 0.5kb downstream 0.5kb downstream 500 false Chr01: 37726947-37727446 Phaseolus vulgaris
Phvul.001G137000 1.0kb upstream 1.0kb upstream 8237 true Chr01: 37727447-37735683 Phaseolus vulgaris
Phvul.001G137000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37734684-37735683 Phaseolus vulgaris
Phvul.001G137000 1.0kb downstream 1.0kb downstream 8237 true Chr01: 37726447-37734683 Phaseolus vulgaris
Phvul.001G137000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37726447-37727446 Phaseolus vulgaris
Phvul.001G137000 2.0kb upstream 2.0kb upstream 9237 true Chr01: 37727447-37736683 Phaseolus vulgaris
Phvul.001G137000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37734684-37736683 Phaseolus vulgaris
Phvul.001G137000 2.0kb downstream 2.0kb downstream 9237 true Chr01: 37725447-37734683 Phaseolus vulgaris
Phvul.001G137000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37725447-37727446 Phaseolus vulgaris
Phvul.001G137000 5.0kb upstream 5.0kb upstream 12237 true Chr01: 37727447-37739683 Phaseolus vulgaris
Phvul.001G137000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37734684-37739683 Phaseolus vulgaris
Phvul.001G137000 5.0kb downstream 5.0kb downstream 12237 true Chr01: 37722447-37734683 Phaseolus vulgaris
Phvul.001G137000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37722447-37727446 Phaseolus vulgaris
Phvul.001G137000 10.0kb upstream 10.0kb upstream 17237 true Chr01: 37727447-37744683 Phaseolus vulgaris
Phvul.001G137000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37734684-37744683 Phaseolus vulgaris
Phvul.001G137000 10.0kb downstream 10.0kb downstream 17237 true Chr01: 37717447-37734683 Phaseolus vulgaris
Phvul.001G137000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37717447-37727446 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308449 5265 Fabidae View MSA
124069702 5270 Rosid View MSA
123749307 5271 Pentapetalae View MSA
122794727 5272 Eudicot View MSA
122049152 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.80766 0.0 38.4682   Low
cufflinks 6.76835 0.0 32.6715   Low
cufflinks 11.9028 0.0 45.7978    
cufflinks 8.06932 0.0 41.7034    
cufflinks 9.19205 0.0 35.126    
cufflinks 16.7765 0.0 67.2951   High
cufflinks 16.2898 0.0 69.5959   High
cufflinks 8.41433 0.0 38.2574    
cufflinks 14.3566 0.0 58.6089    
cufflinks 7.62708 0.0 31.1907    
cufflinks 13.8262 0.0 56.9624    

0 Strain