Gene : Phvul.001G136300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22601:SF8 - OLIGOPEPTIDE TRANSPORTER 1-RELATED Genomic Order:  1335
Name:  ? Phvul.001G136300 Secondary Identifier:  ? PAC:37169334
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G136300 0.5kb upstream 0.5kb upstream 3535 true Chr01: 37566435-37569969 Phaseolus vulgaris
Phvul.001G136300 0.5kb upstream 0.5kb upstream 500 false Chr01: 37569470-37569969 Phaseolus vulgaris
Phvul.001G136300 0.5kb downstream 0.5kb downstream 3535 true Chr01: 37565935-37569469 Phaseolus vulgaris
Phvul.001G136300 0.5kb downstream 0.5kb downstream 500 false Chr01: 37565935-37566434 Phaseolus vulgaris
Phvul.001G136300 1.0kb upstream 1.0kb upstream 4035 true Chr01: 37566435-37570469 Phaseolus vulgaris
Phvul.001G136300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37569470-37570469 Phaseolus vulgaris
Phvul.001G136300 1.0kb downstream 1.0kb downstream 4035 true Chr01: 37565435-37569469 Phaseolus vulgaris
Phvul.001G136300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37565435-37566434 Phaseolus vulgaris
Phvul.001G136300 2.0kb upstream 2.0kb upstream 5035 true Chr01: 37566435-37571469 Phaseolus vulgaris
Phvul.001G136300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37569470-37571469 Phaseolus vulgaris
Phvul.001G136300 2.0kb downstream 2.0kb downstream 5035 true Chr01: 37564435-37569469 Phaseolus vulgaris
Phvul.001G136300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37564435-37566434 Phaseolus vulgaris
Phvul.001G136300 5.0kb upstream 5.0kb upstream 8035 true Chr01: 37566435-37574469 Phaseolus vulgaris
Phvul.001G136300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37569470-37574469 Phaseolus vulgaris
Phvul.001G136300 5.0kb downstream 5.0kb downstream 8035 true Chr01: 37561435-37569469 Phaseolus vulgaris
Phvul.001G136300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37561435-37566434 Phaseolus vulgaris
Phvul.001G136300 10.0kb upstream 10.0kb upstream 13035 true Chr01: 37566435-37579469 Phaseolus vulgaris
Phvul.001G136300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37569470-37579469 Phaseolus vulgaris
Phvul.001G136300 10.0kb downstream 10.0kb downstream 13035 true Chr01: 37556435-37569469 Phaseolus vulgaris
Phvul.001G136300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37556435-37566434 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309897 5265 Fabidae View MSA
124065533 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.59548 0.0 6.95612   Low
cufflinks 2.08872 0.0 8.50976    
cufflinks 1.89496 0.0 7.78717    
cufflinks 3.16936 0.0 11.6193    
cufflinks 2.14597 0.0 8.63738    
cufflinks 3.30705 0.0 11.873    
cufflinks 4.07668 0.0 14.7513   High
cufflinks 1.98189 0.0 7.97978    
cufflinks 3.31297 0.0 11.9246    
cufflinks 2.63657 0.0 9.95436    
cufflinks 2.53789 0.0 9.93629    

0 Strain