Gene : Phvul.001G138400 P. vulgaris v2.1
Defline:  (1 of 6) PTHR12290 - CORNICHON-RELATED Genomic Order:  1359
Name:  ? Phvul.001G138400 Secondary Identifier:  ? PAC:37168119
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G138400 0.5kb upstream 0.5kb upstream 6740 true Chr01: 37949626-37956365 Phaseolus vulgaris
Phvul.001G138400 0.5kb upstream 0.5kb upstream 500 false Chr01: 37955866-37956365 Phaseolus vulgaris
Phvul.001G138400 0.5kb downstream 0.5kb downstream 6740 true Chr01: 37949126-37955865 Phaseolus vulgaris
Phvul.001G138400 0.5kb downstream 0.5kb downstream 500 false Chr01: 37949126-37949625 Phaseolus vulgaris
Phvul.001G138400 1.0kb upstream 1.0kb upstream 7240 true Chr01: 37949626-37956865 Phaseolus vulgaris
Phvul.001G138400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37955866-37956865 Phaseolus vulgaris
Phvul.001G138400 1.0kb downstream 1.0kb downstream 7240 true Chr01: 37948626-37955865 Phaseolus vulgaris
Phvul.001G138400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37948626-37949625 Phaseolus vulgaris
Phvul.001G138400 2.0kb upstream 2.0kb upstream 8240 true Chr01: 37949626-37957865 Phaseolus vulgaris
Phvul.001G138400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37955866-37957865 Phaseolus vulgaris
Phvul.001G138400 2.0kb downstream 2.0kb downstream 8240 true Chr01: 37947626-37955865 Phaseolus vulgaris
Phvul.001G138400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37947626-37949625 Phaseolus vulgaris
Phvul.001G138400 5.0kb upstream 5.0kb upstream 11240 true Chr01: 37949626-37960865 Phaseolus vulgaris
Phvul.001G138400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37955866-37960865 Phaseolus vulgaris
Phvul.001G138400 5.0kb downstream 5.0kb downstream 11240 true Chr01: 37944626-37955865 Phaseolus vulgaris
Phvul.001G138400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37944626-37949625 Phaseolus vulgaris
Phvul.001G138400 10.0kb upstream 10.0kb upstream 16240 true Chr01: 37949626-37965865 Phaseolus vulgaris
Phvul.001G138400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37955866-37965865 Phaseolus vulgaris
Phvul.001G138400 10.0kb downstream 10.0kb downstream 16240 true Chr01: 37939626-37955865 Phaseolus vulgaris
Phvul.001G138400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37939626-37949625 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311032 5265 Fabidae View MSA
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.62651 0.0 18.9234    
cufflinks 2.67286 0.0 18.3371   Low
cufflinks 3.13703 0.0 17.2864    
cufflinks 7.52174 0.0 40.0868   High
cufflinks 5.37133 0.0 25.4082   High
cufflinks 3.49786 0.0 18.5462    
cufflinks 2.42915 0.0 17.611   Low
cufflinks 3.27941 0.0 13.166    
cufflinks 5.68241 0.0 32.3896   High
cufflinks 3.39924 0.0 19.508    
cufflinks 3.41807 0.0 18.0866    

0 Strain