Gene : Phvul.001G123600 P. vulgaris v2.1
Defline:  (1 of 5) PTHR22950:SF269 - EXPRESSED PROTEIN Genomic Order:  1205
Name:  ? Phvul.001G123600 Secondary Identifier:  ? PAC:37169068
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G123600 0.5kb upstream 0.5kb upstream 3169 true Chr01: 34153284-34156452 Phaseolus vulgaris
Phvul.001G123600 0.5kb upstream 0.5kb upstream 500 false Chr01: 34155953-34156452 Phaseolus vulgaris
Phvul.001G123600 0.5kb downstream 0.5kb downstream 3169 true Chr01: 34152784-34155952 Phaseolus vulgaris
Phvul.001G123600 0.5kb downstream 0.5kb downstream 500 false Chr01: 34152784-34153283 Phaseolus vulgaris
Phvul.001G123600 1.0kb upstream 1.0kb upstream 3669 true Chr01: 34153284-34156952 Phaseolus vulgaris
Phvul.001G123600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34155953-34156952 Phaseolus vulgaris
Phvul.001G123600 1.0kb downstream 1.0kb downstream 3669 true Chr01: 34152284-34155952 Phaseolus vulgaris
Phvul.001G123600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34152284-34153283 Phaseolus vulgaris
Phvul.001G123600 2.0kb upstream 2.0kb upstream 4669 true Chr01: 34153284-34157952 Phaseolus vulgaris
Phvul.001G123600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34155953-34157952 Phaseolus vulgaris
Phvul.001G123600 2.0kb downstream 2.0kb downstream 4669 true Chr01: 34151284-34155952 Phaseolus vulgaris
Phvul.001G123600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34151284-34153283 Phaseolus vulgaris
Phvul.001G123600 5.0kb upstream 5.0kb upstream 7669 true Chr01: 34153284-34160952 Phaseolus vulgaris
Phvul.001G123600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34155953-34160952 Phaseolus vulgaris
Phvul.001G123600 5.0kb downstream 5.0kb downstream 7669 true Chr01: 34148284-34155952 Phaseolus vulgaris
Phvul.001G123600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34148284-34153283 Phaseolus vulgaris
Phvul.001G123600 10.0kb upstream 10.0kb upstream 12669 true Chr01: 34153284-34165952 Phaseolus vulgaris
Phvul.001G123600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34155953-34165952 Phaseolus vulgaris
Phvul.001G123600 10.0kb downstream 10.0kb downstream 12669 true Chr01: 34143284-34155952 Phaseolus vulgaris
Phvul.001G123600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34143284-34153283 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314721 5265 Fabidae View MSA
124067158 5270 Rosid View MSA
123753416 5271 Pentapetalae View MSA
122789059 5272 Eudicot View MSA
122047534 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.439094 0.0 1.71494 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0402095 0.0 0.193871 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0404858 0.0 0.196646 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain