Gene : Phvul.001G123200 P. vulgaris v2.1
Defline:  (1 of 7) PF07058 - Microtubule-associated protein 70 (MAP70) Genomic Order:  1201
Name:  ? Phvul.001G123200 Secondary Identifier:  ? PAC:37169486
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G123200 0.5kb upstream 0.5kb upstream 5316 true Chr01: 33959567-33964882 Phaseolus vulgaris
Phvul.001G123200 0.5kb upstream 0.5kb upstream 500 false Chr01: 33964383-33964882 Phaseolus vulgaris
Phvul.001G123200 0.5kb downstream 0.5kb downstream 5316 true Chr01: 33959067-33964382 Phaseolus vulgaris
Phvul.001G123200 0.5kb downstream 0.5kb downstream 500 false Chr01: 33959067-33959566 Phaseolus vulgaris
Phvul.001G123200 1.0kb upstream 1.0kb upstream 5816 true Chr01: 33959567-33965382 Phaseolus vulgaris
Phvul.001G123200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33964383-33965382 Phaseolus vulgaris
Phvul.001G123200 1.0kb downstream 1.0kb downstream 5816 true Chr01: 33958567-33964382 Phaseolus vulgaris
Phvul.001G123200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33958567-33959566 Phaseolus vulgaris
Phvul.001G123200 2.0kb upstream 2.0kb upstream 6816 true Chr01: 33959567-33966382 Phaseolus vulgaris
Phvul.001G123200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33964383-33966382 Phaseolus vulgaris
Phvul.001G123200 2.0kb downstream 2.0kb downstream 6816 true Chr01: 33957567-33964382 Phaseolus vulgaris
Phvul.001G123200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33957567-33959566 Phaseolus vulgaris
Phvul.001G123200 5.0kb upstream 5.0kb upstream 9816 true Chr01: 33959567-33969382 Phaseolus vulgaris
Phvul.001G123200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33964383-33969382 Phaseolus vulgaris
Phvul.001G123200 5.0kb downstream 5.0kb downstream 9816 true Chr01: 33954567-33964382 Phaseolus vulgaris
Phvul.001G123200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33954567-33959566 Phaseolus vulgaris
Phvul.001G123200 10.0kb upstream 10.0kb upstream 14816 true Chr01: 33959567-33974382 Phaseolus vulgaris
Phvul.001G123200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33964383-33974382 Phaseolus vulgaris
Phvul.001G123200 10.0kb downstream 10.0kb downstream 14816 true Chr01: 33949567-33964382 Phaseolus vulgaris
Phvul.001G123200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33949567-33959566 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305679 5265 Fabidae View MSA
124069834 5270 Rosid View MSA
123742889 5271 Pentapetalae View MSA
122794683 5272 Eudicot View MSA
122043033 5273 Angiosperm View MSA
123428932 5275 Viridiplantae View MSA
121344979 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9624 0.0 5.94387   Low
cufflinks 9.979 0.0 26.1016    
cufflinks 22.2484 0.0 57.7226   High
cufflinks 4.40201 0.0 12.344    
cufflinks 7.92867 0.0 21.154    
cufflinks 15.1594 0.0 39.1962    
cufflinks 9.6462 0.0 25.2231    
cufflinks 18.9818 0.0 49.146   High
cufflinks 7.07844 0.0 18.8726    
cufflinks 5.85397 0.0 15.92    
cufflinks 9.27303 0.0 24.4024    

0 Strain