Gene : Phvul.001G126700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Genomic Order:  1237
Name:  ? Phvul.001G126700 Secondary Identifier:  ? PAC:37169413
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G126700 0.5kb upstream 0.5kb upstream 1909 true Chr01: 35205476-35207384 Phaseolus vulgaris
Phvul.001G126700 0.5kb upstream 0.5kb upstream 500 false Chr01: 35206885-35207384 Phaseolus vulgaris
Phvul.001G126700 0.5kb downstream 0.5kb downstream 1909 true Chr01: 35204976-35206884 Phaseolus vulgaris
Phvul.001G126700 0.5kb downstream 0.5kb downstream 500 false Chr01: 35204976-35205475 Phaseolus vulgaris
Phvul.001G126700 1.0kb upstream 1.0kb upstream 2409 true Chr01: 35205476-35207884 Phaseolus vulgaris
Phvul.001G126700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35206885-35207884 Phaseolus vulgaris
Phvul.001G126700 1.0kb downstream 1.0kb downstream 2409 true Chr01: 35204476-35206884 Phaseolus vulgaris
Phvul.001G126700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35204476-35205475 Phaseolus vulgaris
Phvul.001G126700 2.0kb upstream 2.0kb upstream 3409 true Chr01: 35205476-35208884 Phaseolus vulgaris
Phvul.001G126700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35206885-35208884 Phaseolus vulgaris
Phvul.001G126700 2.0kb downstream 2.0kb downstream 3409 true Chr01: 35203476-35206884 Phaseolus vulgaris
Phvul.001G126700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35203476-35205475 Phaseolus vulgaris
Phvul.001G126700 5.0kb upstream 5.0kb upstream 6409 true Chr01: 35205476-35211884 Phaseolus vulgaris
Phvul.001G126700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35206885-35211884 Phaseolus vulgaris
Phvul.001G126700 5.0kb downstream 5.0kb downstream 6409 true Chr01: 35200476-35206884 Phaseolus vulgaris
Phvul.001G126700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35200476-35205475 Phaseolus vulgaris
Phvul.001G126700 10.0kb upstream 10.0kb upstream 11409 true Chr01: 35205476-35216884 Phaseolus vulgaris
Phvul.001G126700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35206885-35216884 Phaseolus vulgaris
Phvul.001G126700 10.0kb downstream 10.0kb downstream 11409 true Chr01: 35195476-35206884 Phaseolus vulgaris
Phvul.001G126700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35195476-35205475 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302946 5265 Fabidae View MSA
124061078 5270 Rosid View MSA
123739522 5271 Pentapetalae View MSA
122793851 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 139.509 0.0 397.543 High  
cufflinks 80.575 0.0 216.094 High  
cufflinks 53.1832 0.0 138.481 High Low
cufflinks 181.955 0.0 537.378 High High
cufflinks 79.0347 0.0 212.947 High  
cufflinks 64.617 0.0 170.371 High  
cufflinks 87.7179 0.0 239.19 High  
cufflinks 148.695 0.0 425.326 High High
cufflinks 48.3671 0.0 126.135 High Low
cufflinks 109.726 0.0 303.576 High  
cufflinks 148.449 0.0 427.395 High  

0 Strain