Gene : Phvul.001G124300 P. vulgaris v2.1
Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  1213
Name:  ? Phvul.001G124300 Secondary Identifier:  ? PAC:37169014
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARG-PRO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PROSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3341 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G124300 0.5kb upstream 0.5kb upstream 4150 true Chr01: 34453141-34457290 Phaseolus vulgaris
Phvul.001G124300 0.5kb upstream 0.5kb upstream 500 false Chr01: 34453141-34453640 Phaseolus vulgaris
Phvul.001G124300 0.5kb downstream 0.5kb downstream 4150 true Chr01: 34453641-34457790 Phaseolus vulgaris
Phvul.001G124300 0.5kb downstream 0.5kb downstream 500 false Chr01: 34457291-34457790 Phaseolus vulgaris
Phvul.001G124300 1.0kb upstream 1.0kb upstream 4650 true Chr01: 34452641-34457290 Phaseolus vulgaris
Phvul.001G124300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34452641-34453640 Phaseolus vulgaris
Phvul.001G124300 1.0kb downstream 1.0kb downstream 4650 true Chr01: 34453641-34458290 Phaseolus vulgaris
Phvul.001G124300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34457291-34458290 Phaseolus vulgaris
Phvul.001G124300 2.0kb upstream 2.0kb upstream 5650 true Chr01: 34451641-34457290 Phaseolus vulgaris
Phvul.001G124300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34451641-34453640 Phaseolus vulgaris
Phvul.001G124300 2.0kb downstream 2.0kb downstream 5650 true Chr01: 34453641-34459290 Phaseolus vulgaris
Phvul.001G124300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34457291-34459290 Phaseolus vulgaris
Phvul.001G124300 5.0kb upstream 5.0kb upstream 8650 true Chr01: 34448641-34457290 Phaseolus vulgaris
Phvul.001G124300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34448641-34453640 Phaseolus vulgaris
Phvul.001G124300 5.0kb downstream 5.0kb downstream 8650 true Chr01: 34453641-34462290 Phaseolus vulgaris
Phvul.001G124300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34457291-34462290 Phaseolus vulgaris
Phvul.001G124300 10.0kb upstream 10.0kb upstream 13650 true Chr01: 34443641-34457290 Phaseolus vulgaris
Phvul.001G124300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34443641-34453640 Phaseolus vulgaris
Phvul.001G124300 10.0kb downstream 10.0kb downstream 13650 true Chr01: 34453641-34467290 Phaseolus vulgaris
Phvul.001G124300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34457291-34467290 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305300 5265 Fabidae View MSA
124061027 5270 Rosid View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7548 0.0 29.4886   Low
cufflinks 20.9974 0.0 54.9432    
cufflinks 24.8731 0.0 64.6997   High
cufflinks 18.2024 0.0 47.9985    
cufflinks 21.2597 0.0 55.648    
cufflinks 19.5485 0.0 51.3416    
cufflinks 15.5761 0.0 41.3254    
cufflinks 16.9933 0.0 44.873    
cufflinks 17.3025 0.0 45.6822    
cufflinks 20.2223 0.0 53.0347    
cufflinks 22.3923 0.0 58.3635    

0 Strain