Gene : Phvul.001G125400 P. vulgaris v2.1
Defline:  (1 of 1) 4.4.1.8 - Cystathionine beta-lyase / Cystine lyase Genomic Order:  1224
Name:  ? Phvul.001G125400 Secondary Identifier:  ? PAC:37169129
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6936 Phaseolus vulgaris pathologic  
Pvulgaris PWY-702 Phaseolus vulgaris pathologic  
Pvulgaris PWY-724 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G125400 0.5kb upstream 0.5kb upstream 7741 true Chr01: 34615717-34623457 Phaseolus vulgaris
Phvul.001G125400 0.5kb upstream 0.5kb upstream 500 false Chr01: 34622958-34623457 Phaseolus vulgaris
Phvul.001G125400 0.5kb downstream 0.5kb downstream 7741 true Chr01: 34615217-34622957 Phaseolus vulgaris
Phvul.001G125400 0.5kb downstream 0.5kb downstream 500 false Chr01: 34615217-34615716 Phaseolus vulgaris
Phvul.001G125400 1.0kb upstream 1.0kb upstream 8241 true Chr01: 34615717-34623957 Phaseolus vulgaris
Phvul.001G125400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34622958-34623957 Phaseolus vulgaris
Phvul.001G125400 1.0kb downstream 1.0kb downstream 8241 true Chr01: 34614717-34622957 Phaseolus vulgaris
Phvul.001G125400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34614717-34615716 Phaseolus vulgaris
Phvul.001G125400 2.0kb upstream 2.0kb upstream 9241 true Chr01: 34615717-34624957 Phaseolus vulgaris
Phvul.001G125400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34622958-34624957 Phaseolus vulgaris
Phvul.001G125400 2.0kb downstream 2.0kb downstream 9241 true Chr01: 34613717-34622957 Phaseolus vulgaris
Phvul.001G125400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34613717-34615716 Phaseolus vulgaris
Phvul.001G125400 5.0kb upstream 5.0kb upstream 12241 true Chr01: 34615717-34627957 Phaseolus vulgaris
Phvul.001G125400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34622958-34627957 Phaseolus vulgaris
Phvul.001G125400 5.0kb downstream 5.0kb downstream 12241 true Chr01: 34610717-34622957 Phaseolus vulgaris
Phvul.001G125400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34610717-34615716 Phaseolus vulgaris
Phvul.001G125400 10.0kb upstream 10.0kb upstream 17241 true Chr01: 34615717-34632957 Phaseolus vulgaris
Phvul.001G125400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34622958-34632957 Phaseolus vulgaris
Phvul.001G125400 10.0kb downstream 10.0kb downstream 17241 true Chr01: 34605717-34622957 Phaseolus vulgaris
Phvul.001G125400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34605717-34615716 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
122309071 5265 Fabidae View MSA
124062752 5270 Rosid View MSA
123751787 5271 Pentapetalae View MSA
122792966 5272 Eudicot View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6014 0.0 49.5492    
cufflinks 18.2976 0.0 51.7005    
cufflinks 29.6306 0.0 82.9518   High
cufflinks 15.9767 0.0 45.8115    
cufflinks 23.3569 0.0 65.257    
cufflinks 11.5142 0.0 34.1976    
cufflinks 8.30032 0.0 25.9695   Low
cufflinks 11.6621 0.0 34.3723    
cufflinks 9.97002 0.0 30.5177   Low
cufflinks 25.8651 0.0 72.1281   High
cufflinks 12.3299 0.0 36.6352    

0 Strain