Gene : Phvul.001G128700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12668//PTHR12668:SF18 - TRANSMEMBRANE PROTEIN 14, 15 // SUBFAMILY NOT NAMED Genomic Order:  1258
Name:  ? Phvul.001G128700 Secondary Identifier:  ? PAC:37171226
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G128700 0.5kb upstream 0.5kb upstream 5544 true Chr01: 35802751-35808294 Phaseolus vulgaris
Phvul.001G128700 0.5kb upstream 0.5kb upstream 500 false Chr01: 35802751-35803250 Phaseolus vulgaris
Phvul.001G128700 0.5kb downstream 0.5kb downstream 5544 true Chr01: 35803251-35808794 Phaseolus vulgaris
Phvul.001G128700 0.5kb downstream 0.5kb downstream 500 false Chr01: 35808295-35808794 Phaseolus vulgaris
Phvul.001G128700 1.0kb upstream 1.0kb upstream 6044 true Chr01: 35802251-35808294 Phaseolus vulgaris
Phvul.001G128700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35802251-35803250 Phaseolus vulgaris
Phvul.001G128700 1.0kb downstream 1.0kb downstream 6044 true Chr01: 35803251-35809294 Phaseolus vulgaris
Phvul.001G128700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35808295-35809294 Phaseolus vulgaris
Phvul.001G128700 2.0kb upstream 2.0kb upstream 7044 true Chr01: 35801251-35808294 Phaseolus vulgaris
Phvul.001G128700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35801251-35803250 Phaseolus vulgaris
Phvul.001G128700 2.0kb downstream 2.0kb downstream 7044 true Chr01: 35803251-35810294 Phaseolus vulgaris
Phvul.001G128700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35808295-35810294 Phaseolus vulgaris
Phvul.001G128700 5.0kb upstream 5.0kb upstream 10044 true Chr01: 35798251-35808294 Phaseolus vulgaris
Phvul.001G128700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35798251-35803250 Phaseolus vulgaris
Phvul.001G128700 5.0kb downstream 5.0kb downstream 10044 true Chr01: 35803251-35813294 Phaseolus vulgaris
Phvul.001G128700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35808295-35813294 Phaseolus vulgaris
Phvul.001G128700 10.0kb upstream 10.0kb upstream 15044 true Chr01: 35793251-35808294 Phaseolus vulgaris
Phvul.001G128700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35793251-35803250 Phaseolus vulgaris
Phvul.001G128700 10.0kb downstream 10.0kb downstream 15044 true Chr01: 35803251-35818294 Phaseolus vulgaris
Phvul.001G128700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35808295-35818294 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307857 5265 Fabidae View MSA
124063072 5270 Rosid View MSA
123745819 5271 Pentapetalae View MSA
122785700 5272 Eudicot View MSA
122045627 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9008 0.0 62.7059    
cufflinks 22.9779 0.0 60.5667    
cufflinks 25.9432 0.0 67.7557    
cufflinks 51.1068 0.0 132.143 High High
cufflinks 16.3839 0.0 44.4958    
cufflinks 18.2222 0.0 48.7142    
cufflinks 15.4139 0.0 41.8094   Low
cufflinks 33.0695 0.0 85.6649 High High
cufflinks 17.9627 0.0 48.3068    
cufflinks 20.7781 0.0 55.2167    
cufflinks 22.151 0.0 58.7709    

0 Strain