Gene : Phvul.001G128600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22942:SF41 - DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL Genomic Order:  1257
Name:  ? Phvul.001G128600 Secondary Identifier:  ? PAC:37170942
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G128600 0.5kb upstream 0.5kb upstream 6192 true Chr01: 35796741-35802932 Phaseolus vulgaris
Phvul.001G128600 0.5kb upstream 0.5kb upstream 500 false Chr01: 35802433-35802932 Phaseolus vulgaris
Phvul.001G128600 0.5kb downstream 0.5kb downstream 6192 true Chr01: 35796241-35802432 Phaseolus vulgaris
Phvul.001G128600 0.5kb downstream 0.5kb downstream 500 false Chr01: 35796241-35796740 Phaseolus vulgaris
Phvul.001G128600 1.0kb upstream 1.0kb upstream 6692 true Chr01: 35796741-35803432 Phaseolus vulgaris
Phvul.001G128600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35802433-35803432 Phaseolus vulgaris
Phvul.001G128600 1.0kb downstream 1.0kb downstream 6692 true Chr01: 35795741-35802432 Phaseolus vulgaris
Phvul.001G128600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35795741-35796740 Phaseolus vulgaris
Phvul.001G128600 2.0kb upstream 2.0kb upstream 7692 true Chr01: 35796741-35804432 Phaseolus vulgaris
Phvul.001G128600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35802433-35804432 Phaseolus vulgaris
Phvul.001G128600 2.0kb downstream 2.0kb downstream 7692 true Chr01: 35794741-35802432 Phaseolus vulgaris
Phvul.001G128600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35794741-35796740 Phaseolus vulgaris
Phvul.001G128600 5.0kb upstream 5.0kb upstream 10692 true Chr01: 35796741-35807432 Phaseolus vulgaris
Phvul.001G128600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35802433-35807432 Phaseolus vulgaris
Phvul.001G128600 5.0kb downstream 5.0kb downstream 10692 true Chr01: 35791741-35802432 Phaseolus vulgaris
Phvul.001G128600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35791741-35796740 Phaseolus vulgaris
Phvul.001G128600 10.0kb upstream 10.0kb upstream 15692 true Chr01: 35796741-35812432 Phaseolus vulgaris
Phvul.001G128600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35802433-35812432 Phaseolus vulgaris
Phvul.001G128600 10.0kb downstream 10.0kb downstream 15692 true Chr01: 35786741-35802432 Phaseolus vulgaris
Phvul.001G128600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35786741-35796740 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026428 5273 Angiosperm View MSA
122305206 5265 Fabidae View MSA
124066586 5270 Rosid View MSA
123739358 5271 Pentapetalae View MSA
122787023 5272 Eudicot View MSA
121296323 5274 Embryophyte View MSA
123334505 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.4754 0.0 8.38036    
cufflinks 3.17331 0.0 10.3793    
cufflinks 3.55537 0.0 11.3073    
cufflinks 2.32573 0.0 8.13421    
cufflinks 2.48845 0.0 8.59022    
cufflinks 3.14371 0.0 10.2682    
cufflinks 2.91224 0.0 12.9189    
cufflinks 4.01191 0.0 15.7624   High
cufflinks 2.59629 0.0 11.8827    
cufflinks 1.15898 0.0 6.91111   Low
cufflinks 3.1423 0.0 10.1347    

0 Strain