Gene : Phvul.001G127900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33790:SF1 - PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 Genomic Order:  1249
Name:  ? Phvul.001G127900 Secondary Identifier:  ? PAC:37168160
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G127900 0.5kb upstream 0.5kb upstream 2171 true Chr01: 35498767-35500937 Phaseolus vulgaris
Phvul.001G127900 0.5kb upstream 0.5kb upstream 500 false Chr01: 35498767-35499266 Phaseolus vulgaris
Phvul.001G127900 0.5kb downstream 0.5kb downstream 2171 true Chr01: 35499267-35501437 Phaseolus vulgaris
Phvul.001G127900 0.5kb downstream 0.5kb downstream 500 false Chr01: 35500938-35501437 Phaseolus vulgaris
Phvul.001G127900 1.0kb upstream 1.0kb upstream 2671 true Chr01: 35498267-35500937 Phaseolus vulgaris
Phvul.001G127900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35498267-35499266 Phaseolus vulgaris
Phvul.001G127900 1.0kb downstream 1.0kb downstream 2671 true Chr01: 35499267-35501937 Phaseolus vulgaris
Phvul.001G127900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35500938-35501937 Phaseolus vulgaris
Phvul.001G127900 2.0kb upstream 2.0kb upstream 3671 true Chr01: 35497267-35500937 Phaseolus vulgaris
Phvul.001G127900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35497267-35499266 Phaseolus vulgaris
Phvul.001G127900 2.0kb downstream 2.0kb downstream 3671 true Chr01: 35499267-35502937 Phaseolus vulgaris
Phvul.001G127900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35500938-35502937 Phaseolus vulgaris
Phvul.001G127900 5.0kb upstream 5.0kb upstream 6671 true Chr01: 35494267-35500937 Phaseolus vulgaris
Phvul.001G127900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35494267-35499266 Phaseolus vulgaris
Phvul.001G127900 5.0kb downstream 5.0kb downstream 6671 true Chr01: 35499267-35505937 Phaseolus vulgaris
Phvul.001G127900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35500938-35505937 Phaseolus vulgaris
Phvul.001G127900 10.0kb upstream 10.0kb upstream 11671 true Chr01: 35489267-35500937 Phaseolus vulgaris
Phvul.001G127900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35489267-35499266 Phaseolus vulgaris
Phvul.001G127900 10.0kb downstream 10.0kb downstream 11671 true Chr01: 35499267-35510937 Phaseolus vulgaris
Phvul.001G127900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35500938-35510937 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311432 5265 Fabidae View MSA
124070452 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 181.631 0.0 743.003 High High
cufflinks 54.9664 0.0 194.619 High  
cufflinks 49.6 0.0 172.437 High  
cufflinks 277.801 0.0 1303.79 High High
cufflinks 97.6005 0.0 354.575 High  
cufflinks 32.2512 0.0 115.787   Low
cufflinks 86.0005 0.0 292.111 High  
cufflinks 57.6892 0.0 193.044 High  
cufflinks 68.6295 0.0 246.268 High  
cufflinks 125.411 0.0 426.917 High  
cufflinks 110.549 0.0 418.7 High  

0 Strain