Gene : Phvul.001G129300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11728:SF17 - 6-PHOSPHOGLUCONATE DEHYDROGENASE-LIKE PROTEIN Genomic Order:  1264
Name:  ? Phvul.001G129300 Secondary Identifier:  ? PAC:37168623
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6118 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7411 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G129300 0.5kb upstream 0.5kb upstream 5033 true Chr01: 36071635-36076667 Phaseolus vulgaris
Phvul.001G129300 0.5kb upstream 0.5kb upstream 500 false Chr01: 36071635-36072134 Phaseolus vulgaris
Phvul.001G129300 0.5kb downstream 0.5kb downstream 5033 true Chr01: 36072135-36077167 Phaseolus vulgaris
Phvul.001G129300 0.5kb downstream 0.5kb downstream 500 false Chr01: 36076668-36077167 Phaseolus vulgaris
Phvul.001G129300 1.0kb upstream 1.0kb upstream 5533 true Chr01: 36071135-36076667 Phaseolus vulgaris
Phvul.001G129300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36071135-36072134 Phaseolus vulgaris
Phvul.001G129300 1.0kb downstream 1.0kb downstream 5533 true Chr01: 36072135-36077667 Phaseolus vulgaris
Phvul.001G129300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36076668-36077667 Phaseolus vulgaris
Phvul.001G129300 2.0kb upstream 2.0kb upstream 6533 true Chr01: 36070135-36076667 Phaseolus vulgaris
Phvul.001G129300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36070135-36072134 Phaseolus vulgaris
Phvul.001G129300 2.0kb downstream 2.0kb downstream 6533 true Chr01: 36072135-36078667 Phaseolus vulgaris
Phvul.001G129300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36076668-36078667 Phaseolus vulgaris
Phvul.001G129300 5.0kb upstream 5.0kb upstream 9533 true Chr01: 36067135-36076667 Phaseolus vulgaris
Phvul.001G129300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36067135-36072134 Phaseolus vulgaris
Phvul.001G129300 5.0kb downstream 5.0kb downstream 9533 true Chr01: 36072135-36081667 Phaseolus vulgaris
Phvul.001G129300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36076668-36081667 Phaseolus vulgaris
Phvul.001G129300 10.0kb upstream 10.0kb upstream 14533 true Chr01: 36062135-36076667 Phaseolus vulgaris
Phvul.001G129300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36062135-36072134 Phaseolus vulgaris
Phvul.001G129300 10.0kb downstream 10.0kb downstream 14533 true Chr01: 36072135-36086667 Phaseolus vulgaris
Phvul.001G129300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36076668-36086667 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311810 5265 Fabidae View MSA
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.77452 0.0 18.3591    
cufflinks 2.66049 0.0 7.8926    
cufflinks 5.22212 0.0 14.4215    
cufflinks 37.3391 0.0 97.8812 High High
cufflinks 4.18482 0.0 11.9136    
cufflinks 9.8131 0.0 25.8474    
cufflinks 3.40791 0.0 9.83274    
cufflinks 2.32692 0.0 6.96574   Low
cufflinks 2.37571 0.0 7.16383    
cufflinks 4.15905 0.0 11.7913    
cufflinks 7.12473 0.0 19.3164    

0 Strain