Gene : Phvul.001G114900 P. vulgaris v2.1
Defline:  (1 of 1) 6.3.1.14 - Diphthine--ammonia ligase / Diphthamide synthetase Genomic Order:  1086
Name:  ? Phvul.001G114900 Secondary Identifier:  ? PAC:37170057
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G114900 0.5kb upstream 0.5kb upstream 8493 true Chr01: 29355068-29363560 Phaseolus vulgaris
Phvul.001G114900 0.5kb upstream 0.5kb upstream 500 false Chr01: 29355068-29355567 Phaseolus vulgaris
Phvul.001G114900 0.5kb downstream 0.5kb downstream 8493 true Chr01: 29355568-29364060 Phaseolus vulgaris
Phvul.001G114900 0.5kb downstream 0.5kb downstream 500 false Chr01: 29363561-29364060 Phaseolus vulgaris
Phvul.001G114900 1.0kb upstream 1.0kb upstream 8993 true Chr01: 29354568-29363560 Phaseolus vulgaris
Phvul.001G114900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29354568-29355567 Phaseolus vulgaris
Phvul.001G114900 1.0kb downstream 1.0kb downstream 8993 true Chr01: 29355568-29364560 Phaseolus vulgaris
Phvul.001G114900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29363561-29364560 Phaseolus vulgaris
Phvul.001G114900 2.0kb upstream 2.0kb upstream 9993 true Chr01: 29353568-29363560 Phaseolus vulgaris
Phvul.001G114900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29353568-29355567 Phaseolus vulgaris
Phvul.001G114900 2.0kb downstream 2.0kb downstream 9993 true Chr01: 29355568-29365560 Phaseolus vulgaris
Phvul.001G114900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29363561-29365560 Phaseolus vulgaris
Phvul.001G114900 5.0kb upstream 5.0kb upstream 12993 true Chr01: 29350568-29363560 Phaseolus vulgaris
Phvul.001G114900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29350568-29355567 Phaseolus vulgaris
Phvul.001G114900 5.0kb downstream 5.0kb downstream 12993 true Chr01: 29355568-29368560 Phaseolus vulgaris
Phvul.001G114900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29363561-29368560 Phaseolus vulgaris
Phvul.001G114900 10.0kb upstream 10.0kb upstream 17993 true Chr01: 29345568-29363560 Phaseolus vulgaris
Phvul.001G114900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29345568-29355567 Phaseolus vulgaris
Phvul.001G114900 10.0kb downstream 10.0kb downstream 17993 true Chr01: 29355568-29373560 Phaseolus vulgaris
Phvul.001G114900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29363561-29373560 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306422 5265 Fabidae View MSA
124064318 5270 Rosid View MSA
123745464 5271 Pentapetalae View MSA
122791964 5272 Eudicot View MSA
122047078 5273 Angiosperm View MSA
121346934 5274 Embryophyte View MSA
123425247 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.29688 0.0 11.4795   Low
cufflinks 4.59098 0.0 15.0159    
cufflinks 5.96042 0.0 18.7039    
cufflinks 3.08587 0.0 11.1689   Low
cufflinks 4.56404 0.0 15.0295    
cufflinks 5.58533 0.0 17.5586    
cufflinks 6.83598 0.0 20.8673    
cufflinks 9.61382 0.0 27.733   High
cufflinks 7.39487 0.0 22.3572   High
cufflinks 5.04111 0.0 16.201    
cufflinks 4.17223 0.0 13.9607    

0 Strain