Gene : Phvul.001G117700 P. vulgaris v2.1
Defline:  (1 of 3) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Genomic Order:  1112
Name:  ? Phvul.001G117700 Secondary Identifier:  ? PAC:37167825
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6724 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7238 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G117700 0.5kb upstream 0.5kb upstream 7493 true Chr01: 29999937-30007429 Phaseolus vulgaris
Phvul.001G117700 0.5kb upstream 0.5kb upstream 500 false Chr01: 29999937-30000436 Phaseolus vulgaris
Phvul.001G117700 0.5kb downstream 0.5kb downstream 7493 true Chr01: 30000437-30007929 Phaseolus vulgaris
Phvul.001G117700 0.5kb downstream 0.5kb downstream 500 false Chr01: 30007430-30007929 Phaseolus vulgaris
Phvul.001G117700 1.0kb upstream 1.0kb upstream 7993 true Chr01: 29999437-30007429 Phaseolus vulgaris
Phvul.001G117700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29999437-30000436 Phaseolus vulgaris
Phvul.001G117700 1.0kb downstream 1.0kb downstream 7993 true Chr01: 30000437-30008429 Phaseolus vulgaris
Phvul.001G117700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30007430-30008429 Phaseolus vulgaris
Phvul.001G117700 2.0kb upstream 2.0kb upstream 8993 true Chr01: 29998437-30007429 Phaseolus vulgaris
Phvul.001G117700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29998437-30000436 Phaseolus vulgaris
Phvul.001G117700 2.0kb downstream 2.0kb downstream 8993 true Chr01: 30000437-30009429 Phaseolus vulgaris
Phvul.001G117700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30007430-30009429 Phaseolus vulgaris
Phvul.001G117700 5.0kb upstream 5.0kb upstream 11993 true Chr01: 29995437-30007429 Phaseolus vulgaris
Phvul.001G117700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29995437-30000436 Phaseolus vulgaris
Phvul.001G117700 5.0kb downstream 5.0kb downstream 11993 true Chr01: 30000437-30012429 Phaseolus vulgaris
Phvul.001G117700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30007430-30012429 Phaseolus vulgaris
Phvul.001G117700 10.0kb upstream 10.0kb upstream 16993 true Chr01: 29990437-30007429 Phaseolus vulgaris
Phvul.001G117700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29990437-30000436 Phaseolus vulgaris
Phvul.001G117700 10.0kb downstream 10.0kb downstream 16993 true Chr01: 30000437-30017429 Phaseolus vulgaris
Phvul.001G117700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30007430-30017429 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310659 5265 Fabidae View MSA
124066396 5270 Rosid View MSA
123736584 5271 Pentapetalae View MSA
122793491 5272 Eudicot View MSA
122045486 5273 Angiosperm View MSA
121345018 5274 Embryophyte View MSA
123425111 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.79704 0.0 23.3379    
cufflinks 12.289 0.0 32.0345    
cufflinks 71.5385 0.0 201.173 High High
cufflinks 9.14726 0.0 24.3367    
cufflinks 19.5 0.0 50.4085    
cufflinks 23.5273 0.0 60.9506    
cufflinks 9.52504 0.0 25.1789    
cufflinks 9.14873 0.0 24.1638    
cufflinks 12.3539 0.0 32.2493    
cufflinks 40.1665 0.0 106.575 High High
cufflinks 16.4788 0.0 42.6655    

0 Strain