Gene : Phvul.001G115700 P. vulgaris v2.1
Defline:  (1 of 5) K01209 - alpha-N-arabinofuranosidase (E3.2.1.55, abfA) Genomic Order:  1094
Name:  ? Phvul.001G115700 Secondary Identifier:  ? PAC:37167857
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G115700 0.5kb upstream 0.5kb upstream 9208 true Chr01: 29625124-29634331 Phaseolus vulgaris
Phvul.001G115700 0.5kb upstream 0.5kb upstream 500 false Chr01: 29625124-29625623 Phaseolus vulgaris
Phvul.001G115700 0.5kb downstream 0.5kb downstream 9208 true Chr01: 29625624-29634831 Phaseolus vulgaris
Phvul.001G115700 0.5kb downstream 0.5kb downstream 500 false Chr01: 29634332-29634831 Phaseolus vulgaris
Phvul.001G115700 1.0kb upstream 1.0kb upstream 9708 true Chr01: 29624624-29634331 Phaseolus vulgaris
Phvul.001G115700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29624624-29625623 Phaseolus vulgaris
Phvul.001G115700 1.0kb downstream 1.0kb downstream 9708 true Chr01: 29625624-29635331 Phaseolus vulgaris
Phvul.001G115700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29634332-29635331 Phaseolus vulgaris
Phvul.001G115700 2.0kb upstream 2.0kb upstream 10708 true Chr01: 29623624-29634331 Phaseolus vulgaris
Phvul.001G115700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29623624-29625623 Phaseolus vulgaris
Phvul.001G115700 2.0kb downstream 2.0kb downstream 10708 true Chr01: 29625624-29636331 Phaseolus vulgaris
Phvul.001G115700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29634332-29636331 Phaseolus vulgaris
Phvul.001G115700 5.0kb upstream 5.0kb upstream 13708 true Chr01: 29620624-29634331 Phaseolus vulgaris
Phvul.001G115700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29620624-29625623 Phaseolus vulgaris
Phvul.001G115700 5.0kb downstream 5.0kb downstream 13708 true Chr01: 29625624-29639331 Phaseolus vulgaris
Phvul.001G115700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29634332-29639331 Phaseolus vulgaris
Phvul.001G115700 10.0kb upstream 10.0kb upstream 18708 true Chr01: 29615624-29634331 Phaseolus vulgaris
Phvul.001G115700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29615624-29625623 Phaseolus vulgaris
Phvul.001G115700 10.0kb downstream 10.0kb downstream 18708 true Chr01: 29625624-29644331 Phaseolus vulgaris
Phvul.001G115700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29634332-29644331 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301820 5265 Fabidae View MSA
124067000 5270 Rosid View MSA
123739948 5271 Pentapetalae View MSA
122792848 5272 Eudicot View MSA
122044822 5273 Angiosperm View MSA
121344375 5274 Embryophyte View MSA
123428022 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 169.451 0.0 539.679 High High
cufflinks 35.3327 0.0 93.1141 High  
cufflinks 41.2831 0.0 110.176 High  
cufflinks 19.817 0.0 51.2232    
cufflinks 46.1467 0.0 123.402 High  
cufflinks 23.2102 0.0 60.1365    
cufflinks 20.3348 0.0 52.5792    
cufflinks 12.2044 0.0 31.7555   Low
cufflinks 26.8257 0.0 69.7144    
cufflinks 84.7965 0.0 242.106 High High
cufflinks 29.8725 0.0 77.8349    

0 Strain