Gene : Phvul.001G119400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR15672:SF15 - EXPRESSED PROTEIN Genomic Order:  1127
Name:  ? Phvul.001G119400 Secondary Identifier:  ? PAC:37170169
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G119400 0.5kb upstream 0.5kb upstream 3764 true Chr01: 30747131-30750894 Phaseolus vulgaris
Phvul.001G119400 0.5kb upstream 0.5kb upstream 500 false Chr01: 30747131-30747630 Phaseolus vulgaris
Phvul.001G119400 0.5kb downstream 0.5kb downstream 3764 true Chr01: 30747631-30751394 Phaseolus vulgaris
Phvul.001G119400 0.5kb downstream 0.5kb downstream 500 false Chr01: 30750895-30751394 Phaseolus vulgaris
Phvul.001G119400 1.0kb upstream 1.0kb upstream 4264 true Chr01: 30746631-30750894 Phaseolus vulgaris
Phvul.001G119400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30746631-30747630 Phaseolus vulgaris
Phvul.001G119400 1.0kb downstream 1.0kb downstream 4264 true Chr01: 30747631-30751894 Phaseolus vulgaris
Phvul.001G119400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30750895-30751894 Phaseolus vulgaris
Phvul.001G119400 2.0kb upstream 2.0kb upstream 5264 true Chr01: 30745631-30750894 Phaseolus vulgaris
Phvul.001G119400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30745631-30747630 Phaseolus vulgaris
Phvul.001G119400 2.0kb downstream 2.0kb downstream 5264 true Chr01: 30747631-30752894 Phaseolus vulgaris
Phvul.001G119400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30750895-30752894 Phaseolus vulgaris
Phvul.001G119400 5.0kb upstream 5.0kb upstream 8264 true Chr01: 30742631-30750894 Phaseolus vulgaris
Phvul.001G119400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30742631-30747630 Phaseolus vulgaris
Phvul.001G119400 5.0kb downstream 5.0kb downstream 8264 true Chr01: 30747631-30755894 Phaseolus vulgaris
Phvul.001G119400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30750895-30755894 Phaseolus vulgaris
Phvul.001G119400 10.0kb upstream 10.0kb upstream 13264 true Chr01: 30737631-30750894 Phaseolus vulgaris
Phvul.001G119400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30737631-30747630 Phaseolus vulgaris
Phvul.001G119400 10.0kb downstream 10.0kb downstream 13264 true Chr01: 30747631-30760894 Phaseolus vulgaris
Phvul.001G119400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30750895-30760894 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299184 5265 Fabidae View MSA
124070671 5270 Rosid View MSA
123753124 5271 Pentapetalae View MSA
122794713 5272 Eudicot View MSA
122048574 5273 Angiosperm View MSA
123428874 5275 Viridiplantae View MSA
121347562 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 76.0081 0.0 203.231 High High
cufflinks 78.3399 0.0 209.771 High High
cufflinks 21.7096 0.0 56.4707    
cufflinks 30.652 0.0 79.3315    
cufflinks 32.5432 0.0 84.1488    
cufflinks 28.2207 0.0 73.006    
cufflinks 24.4926 0.0 63.5841    
cufflinks 24.8093 0.0 64.2729    
cufflinks 24.4907 0.0 63.6381    
cufflinks 118.167 0.0 328.838 High High
cufflinks 26.371 0.0 68.4081    

0 Strain