Gene : Phvul.001G121200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12565:SF158 - TRANSCRIPTION FACTOR BHLH106-RELATED Genomic Order:  1180
Name:  ? Phvul.001G121200 Secondary Identifier:  ? PAC:37169993
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G121200 0.5kb upstream 0.5kb upstream 2529 true Chr01: 33553191-33555719 Phaseolus vulgaris
Phvul.001G121200 0.5kb upstream 0.5kb upstream 500 false Chr01: 33553191-33553690 Phaseolus vulgaris
Phvul.001G121200 0.5kb downstream 0.5kb downstream 2529 true Chr01: 33553691-33556219 Phaseolus vulgaris
Phvul.001G121200 0.5kb downstream 0.5kb downstream 500 false Chr01: 33555720-33556219 Phaseolus vulgaris
Phvul.001G121200 1.0kb upstream 1.0kb upstream 3029 true Chr01: 33552691-33555719 Phaseolus vulgaris
Phvul.001G121200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33552691-33553690 Phaseolus vulgaris
Phvul.001G121200 1.0kb downstream 1.0kb downstream 3029 true Chr01: 33553691-33556719 Phaseolus vulgaris
Phvul.001G121200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33555720-33556719 Phaseolus vulgaris
Phvul.001G121200 2.0kb upstream 2.0kb upstream 4029 true Chr01: 33551691-33555719 Phaseolus vulgaris
Phvul.001G121200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33551691-33553690 Phaseolus vulgaris
Phvul.001G121200 2.0kb downstream 2.0kb downstream 4029 true Chr01: 33553691-33557719 Phaseolus vulgaris
Phvul.001G121200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33555720-33557719 Phaseolus vulgaris
Phvul.001G121200 5.0kb upstream 5.0kb upstream 7029 true Chr01: 33548691-33555719 Phaseolus vulgaris
Phvul.001G121200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33548691-33553690 Phaseolus vulgaris
Phvul.001G121200 5.0kb downstream 5.0kb downstream 7029 true Chr01: 33553691-33560719 Phaseolus vulgaris
Phvul.001G121200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33555720-33560719 Phaseolus vulgaris
Phvul.001G121200 10.0kb upstream 10.0kb upstream 12029 true Chr01: 33543691-33555719 Phaseolus vulgaris
Phvul.001G121200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33543691-33553690 Phaseolus vulgaris
Phvul.001G121200 10.0kb downstream 10.0kb downstream 12029 true Chr01: 33553691-33565719 Phaseolus vulgaris
Phvul.001G121200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33555720-33565719 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308333 5265 Fabidae View MSA
124070702 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.54329 0.0 13.4544    
cufflinks 5.66865 0.0 16.3852    
cufflinks 1.58195 0.0 5.29633   Low
cufflinks 2.02446 0.0 6.54783    
cufflinks 12.6576 0.0 34.0491   High
cufflinks 5.94132 0.0 17.0776    
cufflinks 6.75898 0.0 19.0778    
cufflinks 3.24018 0.0 9.96462    
cufflinks 7.42535 0.0 20.7684    
cufflinks 0.780037 0.0 2.81524   Low
cufflinks 13.665 0.0 36.4925   High

0 Strain