Gene : Phvul.001G120800 P. vulgaris v2.1
Defline:  (1 of 1) K18633 - mitotic-spindle organizing protein 1 (MZT1, GIP1, GIP2) Genomic Order:  1176
Name:  ? Phvul.001G120800 Secondary Identifier:  ? PAC:37168507
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G120800 0.5kb upstream 0.5kb upstream 1608 true Chr01: 33422704-33424311 Phaseolus vulgaris
Phvul.001G120800 0.5kb upstream 0.5kb upstream 500 false Chr01: 33423812-33424311 Phaseolus vulgaris
Phvul.001G120800 0.5kb downstream 0.5kb downstream 1608 true Chr01: 33422204-33423811 Phaseolus vulgaris
Phvul.001G120800 0.5kb downstream 0.5kb downstream 500 false Chr01: 33422204-33422703 Phaseolus vulgaris
Phvul.001G120800 1.0kb upstream 1.0kb upstream 2108 true Chr01: 33422704-33424811 Phaseolus vulgaris
Phvul.001G120800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33423812-33424811 Phaseolus vulgaris
Phvul.001G120800 1.0kb downstream 1.0kb downstream 2108 true Chr01: 33421704-33423811 Phaseolus vulgaris
Phvul.001G120800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33421704-33422703 Phaseolus vulgaris
Phvul.001G120800 2.0kb upstream 2.0kb upstream 3108 true Chr01: 33422704-33425811 Phaseolus vulgaris
Phvul.001G120800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33423812-33425811 Phaseolus vulgaris
Phvul.001G120800 2.0kb downstream 2.0kb downstream 3108 true Chr01: 33420704-33423811 Phaseolus vulgaris
Phvul.001G120800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33420704-33422703 Phaseolus vulgaris
Phvul.001G120800 5.0kb upstream 5.0kb upstream 6108 true Chr01: 33422704-33428811 Phaseolus vulgaris
Phvul.001G120800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33423812-33428811 Phaseolus vulgaris
Phvul.001G120800 5.0kb downstream 5.0kb downstream 6108 true Chr01: 33417704-33423811 Phaseolus vulgaris
Phvul.001G120800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33417704-33422703 Phaseolus vulgaris
Phvul.001G120800 10.0kb upstream 10.0kb upstream 11108 true Chr01: 33422704-33433811 Phaseolus vulgaris
Phvul.001G120800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33423812-33433811 Phaseolus vulgaris
Phvul.001G120800 10.0kb downstream 10.0kb downstream 11108 true Chr01: 33412704-33423811 Phaseolus vulgaris
Phvul.001G120800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33412704-33422703 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026782 5273 Angiosperm View MSA
122311824 5265 Fabidae View MSA
124072134 5270 Rosid View MSA
123747671 5271 Pentapetalae View MSA
122795049 5272 Eudicot View MSA
121344044 5274 Embryophyte View MSA
123425192 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7048 0.0 57.9374    
cufflinks 22.4425 0.0 70.6898   High
cufflinks 12.2492 0.0 43.8067   Low
cufflinks 25.0851 0.0 87.6793   High
cufflinks 21.2669 0.0 77.0795    
cufflinks 14.9718 0.0 51.1728    
cufflinks 17.195 0.0 56.6023    
cufflinks 15.012 0.0 50.9994    
cufflinks 12.5443 0.0 44.6609   Low
cufflinks 13.8153 0.0 47.6679    
cufflinks 18.7977 0.0 70.2054    

0 Strain