Gene : Phvul.001G239800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR20902 - 41-2 PROTEIN ANTIGEN-RELATED Genomic Order:  2378
Name:  ? Phvul.001G239800 Secondary Identifier:  ? PAC:37170676
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G239800 0.5kb upstream 0.5kb upstream 3869 true Chr01: 49281920-49285788 Phaseolus vulgaris
Phvul.001G239800 0.5kb upstream 0.5kb upstream 500 false Chr01: 49281920-49282419 Phaseolus vulgaris
Phvul.001G239800 0.5kb downstream 0.5kb downstream 3869 true Chr01: 49282420-49286288 Phaseolus vulgaris
Phvul.001G239800 0.5kb downstream 0.5kb downstream 500 false Chr01: 49285789-49286288 Phaseolus vulgaris
Phvul.001G239800 1.0kb upstream 1.0kb upstream 4369 true Chr01: 49281420-49285788 Phaseolus vulgaris
Phvul.001G239800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49281420-49282419 Phaseolus vulgaris
Phvul.001G239800 1.0kb downstream 1.0kb downstream 4369 true Chr01: 49282420-49286788 Phaseolus vulgaris
Phvul.001G239800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49285789-49286788 Phaseolus vulgaris
Phvul.001G239800 2.0kb upstream 2.0kb upstream 5369 true Chr01: 49280420-49285788 Phaseolus vulgaris
Phvul.001G239800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49280420-49282419 Phaseolus vulgaris
Phvul.001G239800 2.0kb downstream 2.0kb downstream 5369 true Chr01: 49282420-49287788 Phaseolus vulgaris
Phvul.001G239800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49285789-49287788 Phaseolus vulgaris
Phvul.001G239800 5.0kb upstream 5.0kb upstream 8369 true Chr01: 49277420-49285788 Phaseolus vulgaris
Phvul.001G239800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49277420-49282419 Phaseolus vulgaris
Phvul.001G239800 5.0kb downstream 5.0kb downstream 8369 true Chr01: 49282420-49290788 Phaseolus vulgaris
Phvul.001G239800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49285789-49290788 Phaseolus vulgaris
Phvul.001G239800 10.0kb upstream 10.0kb upstream 13369 true Chr01: 49272420-49285788 Phaseolus vulgaris
Phvul.001G239800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49272420-49282419 Phaseolus vulgaris
Phvul.001G239800 10.0kb downstream 10.0kb downstream 13369 true Chr01: 49282420-49295788 Phaseolus vulgaris
Phvul.001G239800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49285789-49295788 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314696 5265 Fabidae View MSA
124065767 5270 Rosid View MSA
123745459 5271 Pentapetalae View MSA
122785825 5272 Eudicot View MSA
122045467 5273 Angiosperm View MSA
121344565 5274 Embryophyte View MSA
123425941 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2495 0.0 110.13    
cufflinks 28.8988 0.0 102.24    
cufflinks 22.23 0.0 72.5442   Low
cufflinks 38.5987 0.0 121.184 High High
cufflinks 30.1107 0.0 106.604    
cufflinks 18.0328 0.0 60.2881   Low
cufflinks 25.3627 0.0 81.2425    
cufflinks 31.4685 0.0 110.362 High  
cufflinks 31.4909 0.0 110.456 High  
cufflinks 22.6389 0.0 74.2146    
cufflinks 35.9865 0.0 140.001 High High

0 Strain