Gene : Phvul.001G241400 P. vulgaris v2.1
Defline:  (1 of 4) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  2394
Name:  ? Phvul.001G241400 Secondary Identifier:  ? PAC:37169869
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G241400 0.5kb upstream 0.5kb upstream 2205 true Chr01: 49403252-49405456 Phaseolus vulgaris
Phvul.001G241400 0.5kb upstream 0.5kb upstream 500 false Chr01: 49404957-49405456 Phaseolus vulgaris
Phvul.001G241400 0.5kb downstream 0.5kb downstream 2205 true Chr01: 49402752-49404956 Phaseolus vulgaris
Phvul.001G241400 0.5kb downstream 0.5kb downstream 500 false Chr01: 49402752-49403251 Phaseolus vulgaris
Phvul.001G241400 1.0kb upstream 1.0kb upstream 2705 true Chr01: 49403252-49405956 Phaseolus vulgaris
Phvul.001G241400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49404957-49405956 Phaseolus vulgaris
Phvul.001G241400 1.0kb downstream 1.0kb downstream 2705 true Chr01: 49402252-49404956 Phaseolus vulgaris
Phvul.001G241400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49402252-49403251 Phaseolus vulgaris
Phvul.001G241400 2.0kb upstream 2.0kb upstream 3705 true Chr01: 49403252-49406956 Phaseolus vulgaris
Phvul.001G241400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49404957-49406956 Phaseolus vulgaris
Phvul.001G241400 2.0kb downstream 2.0kb downstream 3705 true Chr01: 49401252-49404956 Phaseolus vulgaris
Phvul.001G241400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49401252-49403251 Phaseolus vulgaris
Phvul.001G241400 5.0kb upstream 5.0kb upstream 6705 true Chr01: 49403252-49409956 Phaseolus vulgaris
Phvul.001G241400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49404957-49409956 Phaseolus vulgaris
Phvul.001G241400 5.0kb downstream 5.0kb downstream 6705 true Chr01: 49398252-49404956 Phaseolus vulgaris
Phvul.001G241400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49398252-49403251 Phaseolus vulgaris
Phvul.001G241400 10.0kb upstream 10.0kb upstream 11705 true Chr01: 49403252-49414956 Phaseolus vulgaris
Phvul.001G241400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49404957-49414956 Phaseolus vulgaris
Phvul.001G241400 10.0kb downstream 10.0kb downstream 11705 true Chr01: 49393252-49404956 Phaseolus vulgaris
Phvul.001G241400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49393252-49403251 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254344 5265 Fabidae View MSA
123996547 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0976561 0.0 0.431675 Low  
cufflinks 0.0297375 0.0 0.148527 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.657583 0.0 2.478   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0319334 0.0 0.158423 Low  

0 Strain