Gene : Phvul.001G243000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  2410
Name:  ? Phvul.001G243000 Secondary Identifier:  ? PAC:37170277
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G243000 0.5kb upstream 0.5kb upstream 3689 true Chr01: 49537487-49541175 Phaseolus vulgaris
Phvul.001G243000 0.5kb upstream 0.5kb upstream 500 false Chr01: 49540676-49541175 Phaseolus vulgaris
Phvul.001G243000 0.5kb downstream 0.5kb downstream 3689 true Chr01: 49536987-49540675 Phaseolus vulgaris
Phvul.001G243000 0.5kb downstream 0.5kb downstream 500 false Chr01: 49536987-49537486 Phaseolus vulgaris
Phvul.001G243000 1.0kb upstream 1.0kb upstream 4189 true Chr01: 49537487-49541675 Phaseolus vulgaris
Phvul.001G243000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49540676-49541675 Phaseolus vulgaris
Phvul.001G243000 1.0kb downstream 1.0kb downstream 4189 true Chr01: 49536487-49540675 Phaseolus vulgaris
Phvul.001G243000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49536487-49537486 Phaseolus vulgaris
Phvul.001G243000 2.0kb upstream 2.0kb upstream 5189 true Chr01: 49537487-49542675 Phaseolus vulgaris
Phvul.001G243000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49540676-49542675 Phaseolus vulgaris
Phvul.001G243000 2.0kb downstream 2.0kb downstream 5189 true Chr01: 49535487-49540675 Phaseolus vulgaris
Phvul.001G243000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49535487-49537486 Phaseolus vulgaris
Phvul.001G243000 5.0kb upstream 5.0kb upstream 8189 true Chr01: 49537487-49545675 Phaseolus vulgaris
Phvul.001G243000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49540676-49545675 Phaseolus vulgaris
Phvul.001G243000 5.0kb downstream 5.0kb downstream 8189 true Chr01: 49532487-49540675 Phaseolus vulgaris
Phvul.001G243000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49532487-49537486 Phaseolus vulgaris
Phvul.001G243000 10.0kb upstream 10.0kb upstream 13189 true Chr01: 49537487-49550675 Phaseolus vulgaris
Phvul.001G243000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49540676-49550675 Phaseolus vulgaris
Phvul.001G243000 10.0kb downstream 10.0kb downstream 13189 true Chr01: 49527487-49540675 Phaseolus vulgaris
Phvul.001G243000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49527487-49537486 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311388 5265 Fabidae View MSA
124064129 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9041 0.0 57.4054   High
cufflinks 10.2741 0.0 28.5584    
cufflinks 6.35162 0.0 18.4587   Low
cufflinks 23.6626 0.0 62.0562   High
cufflinks 9.42131 0.0 26.5926    
cufflinks 6.31578 0.0 18.4021   Low
cufflinks 9.39069 0.0 26.2547    
cufflinks 9.08592 0.0 25.4063    
cufflinks 11.183 0.0 30.8576    
cufflinks 12.7581 0.0 34.8744    
cufflinks 13.0805 0.0 35.725    

0 Strain