Gene : Phvul.001G247800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Genomic Order:  2458
Name:  ? Phvul.001G247800 Secondary Identifier:  ? PAC:37169471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G247800 0.5kb upstream 0.5kb upstream 2261 true Chr01: 49921551-49923811 Phaseolus vulgaris
Phvul.001G247800 0.5kb upstream 0.5kb upstream 500 false Chr01: 49923312-49923811 Phaseolus vulgaris
Phvul.001G247800 0.5kb downstream 0.5kb downstream 2261 true Chr01: 49921051-49923311 Phaseolus vulgaris
Phvul.001G247800 0.5kb downstream 0.5kb downstream 500 false Chr01: 49921051-49921550 Phaseolus vulgaris
Phvul.001G247800 1.0kb upstream 1.0kb upstream 2761 true Chr01: 49921551-49924311 Phaseolus vulgaris
Phvul.001G247800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49923312-49924311 Phaseolus vulgaris
Phvul.001G247800 1.0kb downstream 1.0kb downstream 2761 true Chr01: 49920551-49923311 Phaseolus vulgaris
Phvul.001G247800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49920551-49921550 Phaseolus vulgaris
Phvul.001G247800 2.0kb upstream 2.0kb upstream 3761 true Chr01: 49921551-49925311 Phaseolus vulgaris
Phvul.001G247800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49923312-49925311 Phaseolus vulgaris
Phvul.001G247800 2.0kb downstream 2.0kb downstream 3761 true Chr01: 49919551-49923311 Phaseolus vulgaris
Phvul.001G247800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49919551-49921550 Phaseolus vulgaris
Phvul.001G247800 5.0kb upstream 5.0kb upstream 6761 true Chr01: 49921551-49928311 Phaseolus vulgaris
Phvul.001G247800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49923312-49928311 Phaseolus vulgaris
Phvul.001G247800 5.0kb downstream 5.0kb downstream 6761 true Chr01: 49916551-49923311 Phaseolus vulgaris
Phvul.001G247800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49916551-49921550 Phaseolus vulgaris
Phvul.001G247800 10.0kb upstream 10.0kb upstream 11761 true Chr01: 49921551-49933311 Phaseolus vulgaris
Phvul.001G247800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49923312-49933311 Phaseolus vulgaris
Phvul.001G247800 10.0kb downstream 10.0kb downstream 11761 true Chr01: 49911551-49923311 Phaseolus vulgaris
Phvul.001G247800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49911551-49921550 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254179 5265 Fabidae View MSA
123996461 5270 Rosid View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.175635 0.0 0.711653 Low Low
cufflinks 0.811551 0.0 2.89689    
cufflinks 0.941846 0.0 3.29822    
cufflinks 0.61638 0.0 2.27636    
cufflinks 0.957055 0.0 3.38278    
cufflinks 1.39339 0.0 4.69266    
cufflinks 0.960851 0.0 3.37828    
cufflinks 2.12648 0.0 6.79626   High
cufflinks 0.410181 0.0 1.55963 Low Low
cufflinks 1.21505 0.0 4.16055    
cufflinks 0.797219 0.0 2.8655    

0 Strain