Gene : Phvul.001G248400 P. vulgaris v2.1
Defline:  (1 of 4) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  2464
Name:  ? Phvul.001G248400 Secondary Identifier:  ? PAC:37168257
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G248400 0.5kb upstream 0.5kb upstream 1514 true Chr01: 49951092-49952605 Phaseolus vulgaris
Phvul.001G248400 0.5kb upstream 0.5kb upstream 500 false Chr01: 49952106-49952605 Phaseolus vulgaris
Phvul.001G248400 0.5kb downstream 0.5kb downstream 1514 true Chr01: 49950592-49952105 Phaseolus vulgaris
Phvul.001G248400 0.5kb downstream 0.5kb downstream 500 false Chr01: 49950592-49951091 Phaseolus vulgaris
Phvul.001G248400 1.0kb upstream 1.0kb upstream 2014 true Chr01: 49951092-49953105 Phaseolus vulgaris
Phvul.001G248400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49952106-49953105 Phaseolus vulgaris
Phvul.001G248400 1.0kb downstream 1.0kb downstream 2014 true Chr01: 49950092-49952105 Phaseolus vulgaris
Phvul.001G248400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49950092-49951091 Phaseolus vulgaris
Phvul.001G248400 2.0kb upstream 2.0kb upstream 3014 true Chr01: 49951092-49954105 Phaseolus vulgaris
Phvul.001G248400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49952106-49954105 Phaseolus vulgaris
Phvul.001G248400 2.0kb downstream 2.0kb downstream 3014 true Chr01: 49949092-49952105 Phaseolus vulgaris
Phvul.001G248400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49949092-49951091 Phaseolus vulgaris
Phvul.001G248400 5.0kb upstream 5.0kb upstream 6014 true Chr01: 49951092-49957105 Phaseolus vulgaris
Phvul.001G248400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49952106-49957105 Phaseolus vulgaris
Phvul.001G248400 5.0kb downstream 5.0kb downstream 6014 true Chr01: 49946092-49952105 Phaseolus vulgaris
Phvul.001G248400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49946092-49951091 Phaseolus vulgaris
Phvul.001G248400 10.0kb upstream 10.0kb upstream 11014 true Chr01: 49951092-49962105 Phaseolus vulgaris
Phvul.001G248400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49952106-49962105 Phaseolus vulgaris
Phvul.001G248400 10.0kb downstream 10.0kb downstream 11014 true Chr01: 49941092-49952105 Phaseolus vulgaris
Phvul.001G248400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49941092-49951091 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310743 5265 Fabidae View MSA
124071085 5270 Rosid View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.954981 0.0 3.72551    
cufflinks 1.63196 0.0 6.07523    
cufflinks 1.79841 0.0 6.63259    
cufflinks 3.10914 0.0 10.8268    
cufflinks 0.612605 0.0 2.47624 Low  
cufflinks 1.07954 0.0 4.15555    
cufflinks 2.58953 0.0 9.20467    
cufflinks 0.498182 0.0 2.03028    
cufflinks 0.155917 0.0 0.704506 Low Low
cufflinks 5.45587 0.0 18.0614   High
cufflinks 1.84915 0.0 6.82576    

0 Strain