Gene : Phvul.001G246200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 Genomic Order:  2442
Name:  ? Phvul.001G246200 Secondary Identifier:  ? PAC:37167728
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G246200 0.5kb upstream 0.5kb upstream 4857 true Chr01: 49809525-49814381 Phaseolus vulgaris
Phvul.001G246200 0.5kb upstream 0.5kb upstream 500 false Chr01: 49809525-49810024 Phaseolus vulgaris
Phvul.001G246200 0.5kb downstream 0.5kb downstream 4857 true Chr01: 49810025-49814881 Phaseolus vulgaris
Phvul.001G246200 0.5kb downstream 0.5kb downstream 500 false Chr01: 49814382-49814881 Phaseolus vulgaris
Phvul.001G246200 1.0kb upstream 1.0kb upstream 5357 true Chr01: 49809025-49814381 Phaseolus vulgaris
Phvul.001G246200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49809025-49810024 Phaseolus vulgaris
Phvul.001G246200 1.0kb downstream 1.0kb downstream 5357 true Chr01: 49810025-49815381 Phaseolus vulgaris
Phvul.001G246200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49814382-49815381 Phaseolus vulgaris
Phvul.001G246200 2.0kb upstream 2.0kb upstream 6357 true Chr01: 49808025-49814381 Phaseolus vulgaris
Phvul.001G246200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49808025-49810024 Phaseolus vulgaris
Phvul.001G246200 2.0kb downstream 2.0kb downstream 6357 true Chr01: 49810025-49816381 Phaseolus vulgaris
Phvul.001G246200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49814382-49816381 Phaseolus vulgaris
Phvul.001G246200 5.0kb upstream 5.0kb upstream 9357 true Chr01: 49805025-49814381 Phaseolus vulgaris
Phvul.001G246200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49805025-49810024 Phaseolus vulgaris
Phvul.001G246200 5.0kb downstream 5.0kb downstream 9357 true Chr01: 49810025-49819381 Phaseolus vulgaris
Phvul.001G246200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49814382-49819381 Phaseolus vulgaris
Phvul.001G246200 10.0kb upstream 10.0kb upstream 14357 true Chr01: 49800025-49814381 Phaseolus vulgaris
Phvul.001G246200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49800025-49810024 Phaseolus vulgaris
Phvul.001G246200 10.0kb downstream 10.0kb downstream 14357 true Chr01: 49810025-49824381 Phaseolus vulgaris
Phvul.001G246200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49814382-49824381 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297991 5265 Fabidae View MSA
124040978 5270 Rosid View MSA
123747556 5271 Pentapetalae View MSA
122794999 5272 Eudicot View MSA
122044397 5273 Angiosperm View MSA
121310289 5274 Embryophyte View MSA
123347816 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9603 0.0 29.9918    
cufflinks 6.40515 0.0 18.4625    
cufflinks 9.76342 0.0 26.9839    
cufflinks 5.41391 0.0 15.9538   Low
cufflinks 16.928 0.0 45.0245    
cufflinks 4.72743 0.0 14.0861   Low
cufflinks 16.2147 0.0 43.0605    
cufflinks 7.7864 0.0 21.9559    
cufflinks 18.9469 0.0 49.8378    
cufflinks 37.1859 0.0 96.1302 High High
cufflinks 14.7594 0.0 39.6122    

0 Strain