Gene : Phvul.001G247400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22814:SF60 - HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN Genomic Order:  2454
Name:  ? Phvul.001G247400 Secondary Identifier:  ? PAC:37169747
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G247400 0.5kb upstream 0.5kb upstream 1053 true Chr01: 49894723-49895775 Phaseolus vulgaris
Phvul.001G247400 0.5kb upstream 0.5kb upstream 500 false Chr01: 49895276-49895775 Phaseolus vulgaris
Phvul.001G247400 0.5kb downstream 0.5kb downstream 1053 true Chr01: 49894223-49895275 Phaseolus vulgaris
Phvul.001G247400 0.5kb downstream 0.5kb downstream 500 false Chr01: 49894223-49894722 Phaseolus vulgaris
Phvul.001G247400 1.0kb upstream 1.0kb upstream 1553 true Chr01: 49894723-49896275 Phaseolus vulgaris
Phvul.001G247400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49895276-49896275 Phaseolus vulgaris
Phvul.001G247400 1.0kb downstream 1.0kb downstream 1553 true Chr01: 49893723-49895275 Phaseolus vulgaris
Phvul.001G247400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49893723-49894722 Phaseolus vulgaris
Phvul.001G247400 2.0kb upstream 2.0kb upstream 2553 true Chr01: 49894723-49897275 Phaseolus vulgaris
Phvul.001G247400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49895276-49897275 Phaseolus vulgaris
Phvul.001G247400 2.0kb downstream 2.0kb downstream 2553 true Chr01: 49892723-49895275 Phaseolus vulgaris
Phvul.001G247400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49892723-49894722 Phaseolus vulgaris
Phvul.001G247400 5.0kb upstream 5.0kb upstream 5553 true Chr01: 49894723-49900275 Phaseolus vulgaris
Phvul.001G247400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49895276-49900275 Phaseolus vulgaris
Phvul.001G247400 5.0kb downstream 5.0kb downstream 5553 true Chr01: 49889723-49895275 Phaseolus vulgaris
Phvul.001G247400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49889723-49894722 Phaseolus vulgaris
Phvul.001G247400 10.0kb upstream 10.0kb upstream 10553 true Chr01: 49894723-49905275 Phaseolus vulgaris
Phvul.001G247400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49895276-49905275 Phaseolus vulgaris
Phvul.001G247400 10.0kb downstream 10.0kb downstream 10553 true Chr01: 49884723-49895275 Phaseolus vulgaris
Phvul.001G247400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49884723-49894722 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040990 5273 Angiosperm View MSA
122314139 5265 Fabidae View MSA
124065552 5270 Rosid View MSA
123743211 5271 Pentapetalae View MSA
122791151 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.70822 0.0 17.4849   High
cufflinks 4.02518 0.0 15.2017    
cufflinks 0.692468 0.0 3.0181    
cufflinks 0.711542 0.0 3.08557    
cufflinks 2.6328 0.0 10.3659    
cufflinks 0.26253 0.0 1.26579 Low Low
cufflinks 5.5484 0.0 20.4164   High
cufflinks 1.66094 0.0 6.71226    
cufflinks 2.77938 0.0 10.8292    
cufflinks 0.569987 0.0 2.55596   Low
cufflinks 2.80882 0.0 10.9654    

0 Strain