Gene : Phvul.001G230800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23180//PTHR23180:SF285 - CENTAURIN/ARF // SUBFAMILY NOT NAMED Genomic Order:  2289
Name:  ? Phvul.001G230800 Secondary Identifier:  ? PAC:37168702
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G230800 0.5kb upstream 0.5kb upstream 2901 true Chr01: 48502083-48504983 Phaseolus vulgaris
Phvul.001G230800 0.5kb upstream 0.5kb upstream 500 false Chr01: 48504484-48504983 Phaseolus vulgaris
Phvul.001G230800 0.5kb downstream 0.5kb downstream 2901 true Chr01: 48501583-48504483 Phaseolus vulgaris
Phvul.001G230800 0.5kb downstream 0.5kb downstream 500 false Chr01: 48501583-48502082 Phaseolus vulgaris
Phvul.001G230800 1.0kb upstream 1.0kb upstream 3401 true Chr01: 48502083-48505483 Phaseolus vulgaris
Phvul.001G230800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48504484-48505483 Phaseolus vulgaris
Phvul.001G230800 1.0kb downstream 1.0kb downstream 3401 true Chr01: 48501083-48504483 Phaseolus vulgaris
Phvul.001G230800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48501083-48502082 Phaseolus vulgaris
Phvul.001G230800 2.0kb upstream 2.0kb upstream 4401 true Chr01: 48502083-48506483 Phaseolus vulgaris
Phvul.001G230800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48504484-48506483 Phaseolus vulgaris
Phvul.001G230800 2.0kb downstream 2.0kb downstream 4401 true Chr01: 48500083-48504483 Phaseolus vulgaris
Phvul.001G230800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48500083-48502082 Phaseolus vulgaris
Phvul.001G230800 5.0kb upstream 5.0kb upstream 7401 true Chr01: 48502083-48509483 Phaseolus vulgaris
Phvul.001G230800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48504484-48509483 Phaseolus vulgaris
Phvul.001G230800 5.0kb downstream 5.0kb downstream 7401 true Chr01: 48497083-48504483 Phaseolus vulgaris
Phvul.001G230800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48497083-48502082 Phaseolus vulgaris
Phvul.001G230800 10.0kb upstream 10.0kb upstream 12401 true Chr01: 48502083-48514483 Phaseolus vulgaris
Phvul.001G230800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48504484-48514483 Phaseolus vulgaris
Phvul.001G230800 10.0kb downstream 10.0kb downstream 12401 true Chr01: 48492083-48504483 Phaseolus vulgaris
Phvul.001G230800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48492083-48502082 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302781 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.9314 0.0 203.291 High High
cufflinks 16.6387 0.0 45.4291    
cufflinks 20.0132 0.0 53.6599    
cufflinks 37.7581 0.0 98.2218 High  
cufflinks 7.96608 0.0 23.4824   Low
cufflinks 9.90265 0.0 28.3497   Low
cufflinks 14.7812 0.0 40.7096    
cufflinks 21.6667 0.0 57.617    
cufflinks 16.9313 0.0 46.1941    
cufflinks 59.9578 0.0 155.143 High High
cufflinks 13.8191 0.0 38.5041    

0 Strain