Gene : Phvul.001G232700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  2308
Name:  ? Phvul.001G232700 Secondary Identifier:  ? PAC:37171098
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G232700 0.5kb upstream 0.5kb upstream 6151 true Chr01: 48654226-48660376 Phaseolus vulgaris
Phvul.001G232700 0.5kb upstream 0.5kb upstream 500 false Chr01: 48654226-48654725 Phaseolus vulgaris
Phvul.001G232700 0.5kb downstream 0.5kb downstream 6151 true Chr01: 48654726-48660876 Phaseolus vulgaris
Phvul.001G232700 0.5kb downstream 0.5kb downstream 500 false Chr01: 48660377-48660876 Phaseolus vulgaris
Phvul.001G232700 1.0kb upstream 1.0kb upstream 6651 true Chr01: 48653726-48660376 Phaseolus vulgaris
Phvul.001G232700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48653726-48654725 Phaseolus vulgaris
Phvul.001G232700 1.0kb downstream 1.0kb downstream 6651 true Chr01: 48654726-48661376 Phaseolus vulgaris
Phvul.001G232700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48660377-48661376 Phaseolus vulgaris
Phvul.001G232700 2.0kb upstream 2.0kb upstream 7651 true Chr01: 48652726-48660376 Phaseolus vulgaris
Phvul.001G232700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48652726-48654725 Phaseolus vulgaris
Phvul.001G232700 2.0kb downstream 2.0kb downstream 7651 true Chr01: 48654726-48662376 Phaseolus vulgaris
Phvul.001G232700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48660377-48662376 Phaseolus vulgaris
Phvul.001G232700 5.0kb upstream 5.0kb upstream 10651 true Chr01: 48649726-48660376 Phaseolus vulgaris
Phvul.001G232700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48649726-48654725 Phaseolus vulgaris
Phvul.001G232700 5.0kb downstream 5.0kb downstream 10651 true Chr01: 48654726-48665376 Phaseolus vulgaris
Phvul.001G232700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48660377-48665376 Phaseolus vulgaris
Phvul.001G232700 10.0kb upstream 10.0kb upstream 15651 true Chr01: 48644726-48660376 Phaseolus vulgaris
Phvul.001G232700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48644726-48654725 Phaseolus vulgaris
Phvul.001G232700 10.0kb downstream 10.0kb downstream 15651 true Chr01: 48654726-48670376 Phaseolus vulgaris
Phvul.001G232700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48660377-48670376 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302089 5265 Fabidae View MSA
124064371 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.412 0.0 158.699 High High
cufflinks 18.0154 0.0 57.2527    
cufflinks 27.8753 0.0 82.2223    
cufflinks 10.0462 0.0 34.265   Low
cufflinks 16.0356 0.0 50.696    
cufflinks 19.624 0.0 56.6168    
cufflinks 16.5088 0.0 52.1907    
cufflinks 10.3524 0.0 34.9447   Low
cufflinks 19.4069 0.0 63.4062    
cufflinks 21.5341 0.0 70.5288    
cufflinks 16.5389 0.0 51.8075    

0 Strain