Gene : Phvul.001G235100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10811//PTHR10811:SF14 - FRINGE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2331
Name:  ? Phvul.001G235100 Secondary Identifier:  ? PAC:37169927
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G235100 0.5kb upstream 0.5kb upstream 6261 true Chr01: 48866296-48872556 Phaseolus vulgaris
Phvul.001G235100 0.5kb upstream 0.5kb upstream 500 false Chr01: 48866296-48866795 Phaseolus vulgaris
Phvul.001G235100 0.5kb downstream 0.5kb downstream 6261 true Chr01: 48866796-48873056 Phaseolus vulgaris
Phvul.001G235100 0.5kb downstream 0.5kb downstream 500 false Chr01: 48872557-48873056 Phaseolus vulgaris
Phvul.001G235100 1.0kb upstream 1.0kb upstream 6761 true Chr01: 48865796-48872556 Phaseolus vulgaris
Phvul.001G235100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48865796-48866795 Phaseolus vulgaris
Phvul.001G235100 1.0kb downstream 1.0kb downstream 6761 true Chr01: 48866796-48873556 Phaseolus vulgaris
Phvul.001G235100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48872557-48873556 Phaseolus vulgaris
Phvul.001G235100 2.0kb upstream 2.0kb upstream 7761 true Chr01: 48864796-48872556 Phaseolus vulgaris
Phvul.001G235100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48864796-48866795 Phaseolus vulgaris
Phvul.001G235100 2.0kb downstream 2.0kb downstream 7761 true Chr01: 48866796-48874556 Phaseolus vulgaris
Phvul.001G235100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48872557-48874556 Phaseolus vulgaris
Phvul.001G235100 5.0kb upstream 5.0kb upstream 10761 true Chr01: 48861796-48872556 Phaseolus vulgaris
Phvul.001G235100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48861796-48866795 Phaseolus vulgaris
Phvul.001G235100 5.0kb downstream 5.0kb downstream 10761 true Chr01: 48866796-48877556 Phaseolus vulgaris
Phvul.001G235100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48872557-48877556 Phaseolus vulgaris
Phvul.001G235100 10.0kb upstream 10.0kb upstream 15761 true Chr01: 48856796-48872556 Phaseolus vulgaris
Phvul.001G235100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48856796-48866795 Phaseolus vulgaris
Phvul.001G235100 10.0kb downstream 10.0kb downstream 15761 true Chr01: 48866796-48882556 Phaseolus vulgaris
Phvul.001G235100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48872557-48882556 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304361 5265 Fabidae View MSA
124070158 5270 Rosid View MSA
123749213 5271 Pentapetalae View MSA
122793908 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.7142 0.0 5.86354    
cufflinks 4.02869 0.0 13.8021   High
cufflinks 0.642968 0.0 2.59284   Low
cufflinks 3.17209 0.0 11.7842    
cufflinks 1.17409 0.0 4.37722    
cufflinks 1.13442 0.0 4.22725    
cufflinks 2.81578 0.0 10.5205    
cufflinks 4.15302 0.0 14.0699   High
cufflinks 1.34554 0.0 4.7374    
cufflinks 1.90387 0.0 6.39326    
cufflinks 2.44247 0.0 7.7784    

0 Strain