Gene : Phvul.001G237000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12822:SF5 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Genomic Order:  2350
Name:  ? Phvul.001G237000 Secondary Identifier:  ? PAC:37171165
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G237000 0.5kb upstream 0.5kb upstream 3637 true Chr01: 49010868-49014504 Phaseolus vulgaris
Phvul.001G237000 0.5kb upstream 0.5kb upstream 500 false Chr01: 49014005-49014504 Phaseolus vulgaris
Phvul.001G237000 0.5kb downstream 0.5kb downstream 3637 true Chr01: 49010368-49014004 Phaseolus vulgaris
Phvul.001G237000 0.5kb downstream 0.5kb downstream 500 false Chr01: 49010368-49010867 Phaseolus vulgaris
Phvul.001G237000 1.0kb upstream 1.0kb upstream 4137 true Chr01: 49010868-49015004 Phaseolus vulgaris
Phvul.001G237000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49014005-49015004 Phaseolus vulgaris
Phvul.001G237000 1.0kb downstream 1.0kb downstream 4137 true Chr01: 49009868-49014004 Phaseolus vulgaris
Phvul.001G237000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49009868-49010867 Phaseolus vulgaris
Phvul.001G237000 2.0kb upstream 2.0kb upstream 5137 true Chr01: 49010868-49016004 Phaseolus vulgaris
Phvul.001G237000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49014005-49016004 Phaseolus vulgaris
Phvul.001G237000 2.0kb downstream 2.0kb downstream 5137 true Chr01: 49008868-49014004 Phaseolus vulgaris
Phvul.001G237000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49008868-49010867 Phaseolus vulgaris
Phvul.001G237000 5.0kb upstream 5.0kb upstream 8137 true Chr01: 49010868-49019004 Phaseolus vulgaris
Phvul.001G237000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49014005-49019004 Phaseolus vulgaris
Phvul.001G237000 5.0kb downstream 5.0kb downstream 8137 true Chr01: 49005868-49014004 Phaseolus vulgaris
Phvul.001G237000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49005868-49010867 Phaseolus vulgaris
Phvul.001G237000 10.0kb upstream 10.0kb upstream 13137 true Chr01: 49010868-49024004 Phaseolus vulgaris
Phvul.001G237000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49014005-49024004 Phaseolus vulgaris
Phvul.001G237000 10.0kb downstream 10.0kb downstream 13137 true Chr01: 49000868-49014004 Phaseolus vulgaris
Phvul.001G237000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49000868-49010867 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296382 5265 Fabidae View MSA
124061119 5270 Rosid View MSA
123736433 5271 Pentapetalae View MSA
122791105 5272 Eudicot View MSA
122048759 5273 Angiosperm View MSA
121311097 5274 Embryophyte View MSA
123427303 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.33438 0.0 13.8484   Low
cufflinks 4.50999 0.0 14.4293   Low
cufflinks 4.83006 0.0 15.2876    
cufflinks 7.33569 0.0 22.2804   High
cufflinks 6.91598 0.0 21.1237   High
cufflinks 4.3241 0.0 13.9242   Low
cufflinks 6.3626 0.0 19.7039    
cufflinks 6.06788 0.0 18.7766    
cufflinks 6.25167 0.0 19.4658    
cufflinks 6.54067 0.0 20.0227    
cufflinks 5.91454 0.0 18.4599    

0 Strain