Gene : Phvul.001G227600 P. vulgaris v2.1
Defline:  (1 of 1) K07179 - RIO kinase 2 (RIOK2) Genomic Order:  2258
Name:  ? Phvul.001G227600 Secondary Identifier:  ? PAC:37168204
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G227600 0.5kb upstream 0.5kb upstream 6104 true Chr01: 48183327-48189430 Phaseolus vulgaris
Phvul.001G227600 0.5kb upstream 0.5kb upstream 500 false Chr01: 48183327-48183826 Phaseolus vulgaris
Phvul.001G227600 0.5kb downstream 0.5kb downstream 6104 true Chr01: 48183827-48189930 Phaseolus vulgaris
Phvul.001G227600 0.5kb downstream 0.5kb downstream 500 false Chr01: 48189431-48189930 Phaseolus vulgaris
Phvul.001G227600 1.0kb upstream 1.0kb upstream 6604 true Chr01: 48182827-48189430 Phaseolus vulgaris
Phvul.001G227600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48182827-48183826 Phaseolus vulgaris
Phvul.001G227600 1.0kb downstream 1.0kb downstream 6604 true Chr01: 48183827-48190430 Phaseolus vulgaris
Phvul.001G227600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48189431-48190430 Phaseolus vulgaris
Phvul.001G227600 2.0kb upstream 2.0kb upstream 7604 true Chr01: 48181827-48189430 Phaseolus vulgaris
Phvul.001G227600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48181827-48183826 Phaseolus vulgaris
Phvul.001G227600 2.0kb downstream 2.0kb downstream 7604 true Chr01: 48183827-48191430 Phaseolus vulgaris
Phvul.001G227600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48189431-48191430 Phaseolus vulgaris
Phvul.001G227600 5.0kb upstream 5.0kb upstream 10604 true Chr01: 48178827-48189430 Phaseolus vulgaris
Phvul.001G227600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48178827-48183826 Phaseolus vulgaris
Phvul.001G227600 5.0kb downstream 5.0kb downstream 10604 true Chr01: 48183827-48194430 Phaseolus vulgaris
Phvul.001G227600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48189431-48194430 Phaseolus vulgaris
Phvul.001G227600 10.0kb upstream 10.0kb upstream 15604 true Chr01: 48173827-48189430 Phaseolus vulgaris
Phvul.001G227600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48173827-48183826 Phaseolus vulgaris
Phvul.001G227600 10.0kb downstream 10.0kb downstream 15604 true Chr01: 48183827-48199430 Phaseolus vulgaris
Phvul.001G227600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48189431-48199430 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305770 5265 Fabidae View MSA
124060478 5270 Rosid View MSA
123743983 5271 Pentapetalae View MSA
122786408 5272 Eudicot View MSA
122045504 5273 Angiosperm View MSA
121346545 5274 Embryophyte View MSA
123428706 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3553 0.0 32.5786    
cufflinks 12.2665 0.0 32.3694    
cufflinks 17.1575 0.0 44.554    
cufflinks 8.82335 0.0 24.0763   Low
cufflinks 13.406 0.0 35.4335    
cufflinks 9.99278 0.0 26.7409   Low
cufflinks 13.5754 0.0 35.5854    
cufflinks 15.6486 0.0 40.7069    
cufflinks 13.3912 0.0 35.1548    
cufflinks 22.0726 0.0 57.0857   High
cufflinks 13.7108 0.0 36.0527    

0 Strain