Gene : Phvul.001G229600 P. vulgaris v2.1
Defline:  (1 of 1) K06678 - condensin complex subunit 3 (YCG1, CAPG) Genomic Order:  2277
Name:  ? Phvul.001G229600 Secondary Identifier:  ? PAC:37168638
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G229600 0.5kb upstream 0.5kb upstream 6997 true Chr01: 48361315-48368311 Phaseolus vulgaris
Phvul.001G229600 0.5kb upstream 0.5kb upstream 500 false Chr01: 48361315-48361814 Phaseolus vulgaris
Phvul.001G229600 0.5kb downstream 0.5kb downstream 6997 true Chr01: 48361815-48368811 Phaseolus vulgaris
Phvul.001G229600 0.5kb downstream 0.5kb downstream 500 false Chr01: 48368312-48368811 Phaseolus vulgaris
Phvul.001G229600 1.0kb upstream 1.0kb upstream 7497 true Chr01: 48360815-48368311 Phaseolus vulgaris
Phvul.001G229600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48360815-48361814 Phaseolus vulgaris
Phvul.001G229600 1.0kb downstream 1.0kb downstream 7497 true Chr01: 48361815-48369311 Phaseolus vulgaris
Phvul.001G229600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48368312-48369311 Phaseolus vulgaris
Phvul.001G229600 2.0kb upstream 2.0kb upstream 8497 true Chr01: 48359815-48368311 Phaseolus vulgaris
Phvul.001G229600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48359815-48361814 Phaseolus vulgaris
Phvul.001G229600 2.0kb downstream 2.0kb downstream 8497 true Chr01: 48361815-48370311 Phaseolus vulgaris
Phvul.001G229600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48368312-48370311 Phaseolus vulgaris
Phvul.001G229600 5.0kb upstream 5.0kb upstream 11497 true Chr01: 48356815-48368311 Phaseolus vulgaris
Phvul.001G229600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48356815-48361814 Phaseolus vulgaris
Phvul.001G229600 5.0kb downstream 5.0kb downstream 11497 true Chr01: 48361815-48373311 Phaseolus vulgaris
Phvul.001G229600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48368312-48373311 Phaseolus vulgaris
Phvul.001G229600 10.0kb upstream 10.0kb upstream 16497 true Chr01: 48351815-48368311 Phaseolus vulgaris
Phvul.001G229600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48351815-48361814 Phaseolus vulgaris
Phvul.001G229600 10.0kb downstream 10.0kb downstream 16497 true Chr01: 48361815-48378311 Phaseolus vulgaris
Phvul.001G229600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48368312-48378311 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300828 5265 Fabidae View MSA
124061667 5270 Rosid View MSA
123740928 5271 Pentapetalae View MSA
122788754 5272 Eudicot View MSA
122047296 5273 Angiosperm View MSA
121344674 5274 Embryophyte View MSA
123424911 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.3559 0.0 6.83797    
cufflinks 7.87767 0.0 20.6561   High
cufflinks 1.63764 0.0 4.94758    
cufflinks 2.01474 0.0 5.98051    
cufflinks 3.86341 0.0 10.7347    
cufflinks 6.29078 0.0 16.722    
cufflinks 4.92223 0.0 13.3564    
cufflinks 3.5172 0.0 9.81414    
cufflinks 6.89109 0.0 18.2434    
cufflinks 0.546716 0.0 1.87598   Low
cufflinks 3.70643 0.0 10.3323    

0 Strain