Gene : Phvul.001G228200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10527:SF5 - FI07923P Genomic Order:  2264
Name:  ? Phvul.001G228200 Secondary Identifier:  ? PAC:37171065
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G228200 0.5kb upstream 0.5kb upstream 4456 true Chr01: 48253697-48258152 Phaseolus vulgaris
Phvul.001G228200 0.5kb upstream 0.5kb upstream 500 false Chr01: 48253697-48254196 Phaseolus vulgaris
Phvul.001G228200 0.5kb downstream 0.5kb downstream 4456 true Chr01: 48254197-48258652 Phaseolus vulgaris
Phvul.001G228200 0.5kb downstream 0.5kb downstream 500 false Chr01: 48258153-48258652 Phaseolus vulgaris
Phvul.001G228200 1.0kb upstream 1.0kb upstream 4956 true Chr01: 48253197-48258152 Phaseolus vulgaris
Phvul.001G228200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48253197-48254196 Phaseolus vulgaris
Phvul.001G228200 1.0kb downstream 1.0kb downstream 4956 true Chr01: 48254197-48259152 Phaseolus vulgaris
Phvul.001G228200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48258153-48259152 Phaseolus vulgaris
Phvul.001G228200 2.0kb upstream 2.0kb upstream 5956 true Chr01: 48252197-48258152 Phaseolus vulgaris
Phvul.001G228200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48252197-48254196 Phaseolus vulgaris
Phvul.001G228200 2.0kb downstream 2.0kb downstream 5956 true Chr01: 48254197-48260152 Phaseolus vulgaris
Phvul.001G228200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48258153-48260152 Phaseolus vulgaris
Phvul.001G228200 5.0kb upstream 5.0kb upstream 8956 true Chr01: 48249197-48258152 Phaseolus vulgaris
Phvul.001G228200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48249197-48254196 Phaseolus vulgaris
Phvul.001G228200 5.0kb downstream 5.0kb downstream 8956 true Chr01: 48254197-48263152 Phaseolus vulgaris
Phvul.001G228200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48258153-48263152 Phaseolus vulgaris
Phvul.001G228200 10.0kb upstream 10.0kb upstream 13956 true Chr01: 48244197-48258152 Phaseolus vulgaris
Phvul.001G228200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48244197-48254196 Phaseolus vulgaris
Phvul.001G228200 10.0kb downstream 10.0kb downstream 13956 true Chr01: 48254197-48268152 Phaseolus vulgaris
Phvul.001G228200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48258153-48268152 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303248 5265 Fabidae View MSA
124072695 5270 Rosid View MSA
123744874 5271 Pentapetalae View MSA
122785605 5272 Eudicot View MSA
122049923 5273 Angiosperm View MSA
123429119 5275 Viridiplantae View MSA
121344058 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.107145 0.0 0.44445 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0236597 0.0 0.114076 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0093802 0.0 0.0501737 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain