Gene : Phvul.001G216400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22938 - ZINC FINGER PROTEIN 598 Genomic Order:  2147
Name:  ? Phvul.001G216400 Secondary Identifier:  ? PAC:37168654
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G216400 0.5kb upstream 0.5kb upstream 5111 true Chr01: 47258324-47263434 Phaseolus vulgaris
Phvul.001G216400 0.5kb upstream 0.5kb upstream 500 false Chr01: 47258324-47258823 Phaseolus vulgaris
Phvul.001G216400 0.5kb downstream 0.5kb downstream 5111 true Chr01: 47258824-47263934 Phaseolus vulgaris
Phvul.001G216400 0.5kb downstream 0.5kb downstream 500 false Chr01: 47263435-47263934 Phaseolus vulgaris
Phvul.001G216400 1.0kb upstream 1.0kb upstream 5611 true Chr01: 47257824-47263434 Phaseolus vulgaris
Phvul.001G216400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47257824-47258823 Phaseolus vulgaris
Phvul.001G216400 1.0kb downstream 1.0kb downstream 5611 true Chr01: 47258824-47264434 Phaseolus vulgaris
Phvul.001G216400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47263435-47264434 Phaseolus vulgaris
Phvul.001G216400 2.0kb upstream 2.0kb upstream 6611 true Chr01: 47256824-47263434 Phaseolus vulgaris
Phvul.001G216400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47256824-47258823 Phaseolus vulgaris
Phvul.001G216400 2.0kb downstream 2.0kb downstream 6611 true Chr01: 47258824-47265434 Phaseolus vulgaris
Phvul.001G216400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47263435-47265434 Phaseolus vulgaris
Phvul.001G216400 5.0kb upstream 5.0kb upstream 9611 true Chr01: 47253824-47263434 Phaseolus vulgaris
Phvul.001G216400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47253824-47258823 Phaseolus vulgaris
Phvul.001G216400 5.0kb downstream 5.0kb downstream 9611 true Chr01: 47258824-47268434 Phaseolus vulgaris
Phvul.001G216400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47263435-47268434 Phaseolus vulgaris
Phvul.001G216400 10.0kb upstream 10.0kb upstream 14611 true Chr01: 47248824-47263434 Phaseolus vulgaris
Phvul.001G216400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47248824-47258823 Phaseolus vulgaris
Phvul.001G216400 10.0kb downstream 10.0kb downstream 14611 true Chr01: 47258824-47273434 Phaseolus vulgaris
Phvul.001G216400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47263435-47273434 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301223 5265 Fabidae View MSA
124067770 5270 Rosid View MSA
123753693 5271 Pentapetalae View MSA
122788465 5272 Eudicot View MSA
122042596 5273 Angiosperm View MSA
121350951 5274 Embryophyte View MSA
123428352 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.67099 0.0 22.5001   Low
cufflinks 10.8486 0.0 28.0494    
cufflinks 13.7515 0.0 35.5887    
cufflinks 7.28518 0.0 19.0872   Low
cufflinks 12.1105 0.0 31.3059    
cufflinks 11.8484 0.0 30.6262    
cufflinks 13.7192 0.0 35.5106    
cufflinks 12.5211 0.0 32.3805    
cufflinks 15.4007 0.0 39.9414   High
cufflinks 17.645 0.0 45.9148   High
cufflinks 11.2234 0.0 29.0203    

0 Strain