Gene : Phvul.001G216700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11964:SF18 - S-ADENOSYLMETHIONINE SYNTHASE 2 Genomic Order:  2150
Name:  ? Phvul.001G216700 Secondary Identifier:  ? PAC:37170888
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ETHYL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5041 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7528 Phaseolus vulgaris pathologic  
Pvulgaris SAM-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G216700 0.5kb upstream 0.5kb upstream 3057 true Chr01: 47291419-47294475 Phaseolus vulgaris
Phvul.001G216700 0.5kb upstream 0.5kb upstream 500 false Chr01: 47291419-47291918 Phaseolus vulgaris
Phvul.001G216700 0.5kb downstream 0.5kb downstream 3057 true Chr01: 47291919-47294975 Phaseolus vulgaris
Phvul.001G216700 0.5kb downstream 0.5kb downstream 500 false Chr01: 47294476-47294975 Phaseolus vulgaris
Phvul.001G216700 1.0kb upstream 1.0kb upstream 3557 true Chr01: 47290919-47294475 Phaseolus vulgaris
Phvul.001G216700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47290919-47291918 Phaseolus vulgaris
Phvul.001G216700 1.0kb downstream 1.0kb downstream 3557 true Chr01: 47291919-47295475 Phaseolus vulgaris
Phvul.001G216700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47294476-47295475 Phaseolus vulgaris
Phvul.001G216700 2.0kb upstream 2.0kb upstream 4557 true Chr01: 47289919-47294475 Phaseolus vulgaris
Phvul.001G216700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47289919-47291918 Phaseolus vulgaris
Phvul.001G216700 2.0kb downstream 2.0kb downstream 4557 true Chr01: 47291919-47296475 Phaseolus vulgaris
Phvul.001G216700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47294476-47296475 Phaseolus vulgaris
Phvul.001G216700 5.0kb upstream 5.0kb upstream 7557 true Chr01: 47286919-47294475 Phaseolus vulgaris
Phvul.001G216700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47286919-47291918 Phaseolus vulgaris
Phvul.001G216700 5.0kb downstream 5.0kb downstream 7557 true Chr01: 47291919-47299475 Phaseolus vulgaris
Phvul.001G216700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47294476-47299475 Phaseolus vulgaris
Phvul.001G216700 10.0kb upstream 10.0kb upstream 12557 true Chr01: 47281919-47294475 Phaseolus vulgaris
Phvul.001G216700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47281919-47291918 Phaseolus vulgaris
Phvul.001G216700 10.0kb downstream 10.0kb downstream 12557 true Chr01: 47291919-47304475 Phaseolus vulgaris
Phvul.001G216700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47294476-47304475 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312282 5265 Fabidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.938 0.0 163.543 High Low
cufflinks 137.847 0.0 405.076 High  
cufflinks 93.3318 0.0 261.656 High  
cufflinks 259.774 0.0 847.2 High  
cufflinks 239.851 0.0 773.414 High  
cufflinks 192.836 0.0 597.023 High  
cufflinks 110.576 0.0 317.104 High  
cufflinks 94.0584 0.0 263.296 High  
cufflinks 118.24 0.0 342.305 High  
cufflinks 167.351 0.0 504.725 High  
cufflinks 452.969 0.0 1675.98 High High

0 Strain