Gene : Phvul.001G219600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR15561 - CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN Genomic Order:  2179
Name:  ? Phvul.001G219600 Secondary Identifier:  ? PAC:37169830
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G219600 0.5kb upstream 0.5kb upstream 4561 true Chr01: 47508882-47513442 Phaseolus vulgaris
Phvul.001G219600 0.5kb upstream 0.5kb upstream 500 false Chr01: 47508882-47509381 Phaseolus vulgaris
Phvul.001G219600 0.5kb downstream 0.5kb downstream 4561 true Chr01: 47509382-47513942 Phaseolus vulgaris
Phvul.001G219600 0.5kb downstream 0.5kb downstream 500 false Chr01: 47513443-47513942 Phaseolus vulgaris
Phvul.001G219600 1.0kb upstream 1.0kb upstream 5061 true Chr01: 47508382-47513442 Phaseolus vulgaris
Phvul.001G219600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47508382-47509381 Phaseolus vulgaris
Phvul.001G219600 1.0kb downstream 1.0kb downstream 5061 true Chr01: 47509382-47514442 Phaseolus vulgaris
Phvul.001G219600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47513443-47514442 Phaseolus vulgaris
Phvul.001G219600 2.0kb upstream 2.0kb upstream 6061 true Chr01: 47507382-47513442 Phaseolus vulgaris
Phvul.001G219600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47507382-47509381 Phaseolus vulgaris
Phvul.001G219600 2.0kb downstream 2.0kb downstream 6061 true Chr01: 47509382-47515442 Phaseolus vulgaris
Phvul.001G219600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47513443-47515442 Phaseolus vulgaris
Phvul.001G219600 5.0kb upstream 5.0kb upstream 9061 true Chr01: 47504382-47513442 Phaseolus vulgaris
Phvul.001G219600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47504382-47509381 Phaseolus vulgaris
Phvul.001G219600 5.0kb downstream 5.0kb downstream 9061 true Chr01: 47509382-47518442 Phaseolus vulgaris
Phvul.001G219600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47513443-47518442 Phaseolus vulgaris
Phvul.001G219600 10.0kb upstream 10.0kb upstream 14061 true Chr01: 47499382-47513442 Phaseolus vulgaris
Phvul.001G219600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47499382-47509381 Phaseolus vulgaris
Phvul.001G219600 10.0kb downstream 10.0kb downstream 14061 true Chr01: 47509382-47523442 Phaseolus vulgaris
Phvul.001G219600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47513443-47523442 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305183 5265 Fabidae View MSA
124063506 5270 Rosid View MSA
123740278 5271 Pentapetalae View MSA
122796140 5272 Eudicot View MSA
122047210 5273 Angiosperm View MSA
121347420 5274 Embryophyte View MSA
123427400 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.65726 0.0 11.609    
cufflinks 2.89863 0.0 12.0988    
cufflinks 6.8289 0.0 33.7533   High
cufflinks 2.65724 0.0 17.0103    
cufflinks 2.37921 0.0 13.7041    
cufflinks 4.11773 0.0 20.6188   High
cufflinks 0.83132 0.0 3.29279   Low
cufflinks 1.44029 0.0 9.13603    
cufflinks 1.1517 0.0 7.94482    
cufflinks 2.21772 0.0 14.9653    
cufflinks 0.928708 0.0 3.66266   Low

0 Strain