Gene : Phvul.001G219400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11071:SF247 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D Genomic Order:  2177
Name:  ? Phvul.001G219400 Secondary Identifier:  ? PAC:37171076
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G219400 0.5kb upstream 0.5kb upstream 2982 true Chr01: 47490702-47493683 Phaseolus vulgaris
Phvul.001G219400 0.5kb upstream 0.5kb upstream 500 false Chr01: 47493184-47493683 Phaseolus vulgaris
Phvul.001G219400 0.5kb downstream 0.5kb downstream 2982 true Chr01: 47490202-47493183 Phaseolus vulgaris
Phvul.001G219400 0.5kb downstream 0.5kb downstream 500 false Chr01: 47490202-47490701 Phaseolus vulgaris
Phvul.001G219400 1.0kb upstream 1.0kb upstream 3482 true Chr01: 47490702-47494183 Phaseolus vulgaris
Phvul.001G219400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47493184-47494183 Phaseolus vulgaris
Phvul.001G219400 1.0kb downstream 1.0kb downstream 3482 true Chr01: 47489702-47493183 Phaseolus vulgaris
Phvul.001G219400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47489702-47490701 Phaseolus vulgaris
Phvul.001G219400 2.0kb upstream 2.0kb upstream 4482 true Chr01: 47490702-47495183 Phaseolus vulgaris
Phvul.001G219400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47493184-47495183 Phaseolus vulgaris
Phvul.001G219400 2.0kb downstream 2.0kb downstream 4482 true Chr01: 47488702-47493183 Phaseolus vulgaris
Phvul.001G219400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47488702-47490701 Phaseolus vulgaris
Phvul.001G219400 5.0kb upstream 5.0kb upstream 7482 true Chr01: 47490702-47498183 Phaseolus vulgaris
Phvul.001G219400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47493184-47498183 Phaseolus vulgaris
Phvul.001G219400 5.0kb downstream 5.0kb downstream 7482 true Chr01: 47485702-47493183 Phaseolus vulgaris
Phvul.001G219400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47485702-47490701 Phaseolus vulgaris
Phvul.001G219400 10.0kb upstream 10.0kb upstream 12482 true Chr01: 47490702-47503183 Phaseolus vulgaris
Phvul.001G219400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47493184-47503183 Phaseolus vulgaris
Phvul.001G219400 10.0kb downstream 10.0kb downstream 12482 true Chr01: 47480702-47493183 Phaseolus vulgaris
Phvul.001G219400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47480702-47490701 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300588 5265 Fabidae View MSA
124069155 5270 Rosid View MSA
123741646 5271 Pentapetalae View MSA
122794502 5272 Eudicot View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.2811 0.0 167.921 High  
cufflinks 92.3158 0.0 270.983 High  
cufflinks 84.2332 0.0 244.924 High  
cufflinks 62.3566 0.0 176.561 High  
cufflinks 55.9198 0.0 156.388 High  
cufflinks 157.695 0.0 512.463 High High
cufflinks 16.7494 0.0 54.4007   Low
cufflinks 30.2156 0.0 85.7821 High  
cufflinks 24.5226 0.0 81.2004    
cufflinks 20.3355 0.0 58.9048   Low
cufflinks 38.8114 0.0 108.685 High  

0 Strain