Gene : Phvul.001G222100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED Genomic Order:  2203
Name:  ? Phvul.001G222100 Secondary Identifier:  ? PAC:37170594
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G222100 0.5kb upstream 0.5kb upstream 4722 true Chr01: 47749059-47753780 Phaseolus vulgaris
Phvul.001G222100 0.5kb upstream 0.5kb upstream 500 false Chr01: 47753281-47753780 Phaseolus vulgaris
Phvul.001G222100 0.5kb downstream 0.5kb downstream 4722 true Chr01: 47748559-47753280 Phaseolus vulgaris
Phvul.001G222100 0.5kb downstream 0.5kb downstream 500 false Chr01: 47748559-47749058 Phaseolus vulgaris
Phvul.001G222100 1.0kb upstream 1.0kb upstream 5222 true Chr01: 47749059-47754280 Phaseolus vulgaris
Phvul.001G222100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47753281-47754280 Phaseolus vulgaris
Phvul.001G222100 1.0kb downstream 1.0kb downstream 5222 true Chr01: 47748059-47753280 Phaseolus vulgaris
Phvul.001G222100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47748059-47749058 Phaseolus vulgaris
Phvul.001G222100 2.0kb upstream 2.0kb upstream 6222 true Chr01: 47749059-47755280 Phaseolus vulgaris
Phvul.001G222100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47753281-47755280 Phaseolus vulgaris
Phvul.001G222100 2.0kb downstream 2.0kb downstream 6222 true Chr01: 47747059-47753280 Phaseolus vulgaris
Phvul.001G222100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47747059-47749058 Phaseolus vulgaris
Phvul.001G222100 5.0kb upstream 5.0kb upstream 9222 true Chr01: 47749059-47758280 Phaseolus vulgaris
Phvul.001G222100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47753281-47758280 Phaseolus vulgaris
Phvul.001G222100 5.0kb downstream 5.0kb downstream 9222 true Chr01: 47744059-47753280 Phaseolus vulgaris
Phvul.001G222100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47744059-47749058 Phaseolus vulgaris
Phvul.001G222100 10.0kb upstream 10.0kb upstream 14222 true Chr01: 47749059-47763280 Phaseolus vulgaris
Phvul.001G222100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47753281-47763280 Phaseolus vulgaris
Phvul.001G222100 10.0kb downstream 10.0kb downstream 14222 true Chr01: 47739059-47753280 Phaseolus vulgaris
Phvul.001G222100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47739059-47749058 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313872 5265 Fabidae View MSA
124071127 5270 Rosid View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1124.9 0.0 5239.26 High High
cufflinks 222.688 0.0 695.822 High  
cufflinks 142.41 0.0 418.4 High  
cufflinks 208.875 0.0 636.213 High  
cufflinks 173.498 0.0 516.093 High  
cufflinks 128.096 0.0 369.015 High  
cufflinks 168.489 0.0 501.916 High  
cufflinks 112.057 0.0 318.814 High Low
cufflinks 247.65 0.0 779.735 High  
cufflinks 428.42 0.0 1528.73 High High
cufflinks 153.226 0.0 448.346 High  

0 Strain