Gene : Phvul.001G224000 P. vulgaris v2.1
Defline:  (1 of 2) K12398 - AP-3 complex subunit mu (AP3M) Genomic Order:  2222
Name:  ? Phvul.001G224000 Secondary Identifier:  ? PAC:37170283
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G224000 0.5kb upstream 0.5kb upstream 3972 true Chr01: 47889586-47893557 Phaseolus vulgaris
Phvul.001G224000 0.5kb upstream 0.5kb upstream 500 false Chr01: 47889586-47890085 Phaseolus vulgaris
Phvul.001G224000 0.5kb downstream 0.5kb downstream 3972 true Chr01: 47890086-47894057 Phaseolus vulgaris
Phvul.001G224000 0.5kb downstream 0.5kb downstream 500 false Chr01: 47893558-47894057 Phaseolus vulgaris
Phvul.001G224000 1.0kb upstream 1.0kb upstream 4472 true Chr01: 47889086-47893557 Phaseolus vulgaris
Phvul.001G224000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47889086-47890085 Phaseolus vulgaris
Phvul.001G224000 1.0kb downstream 1.0kb downstream 4472 true Chr01: 47890086-47894557 Phaseolus vulgaris
Phvul.001G224000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47893558-47894557 Phaseolus vulgaris
Phvul.001G224000 2.0kb upstream 2.0kb upstream 5472 true Chr01: 47888086-47893557 Phaseolus vulgaris
Phvul.001G224000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47888086-47890085 Phaseolus vulgaris
Phvul.001G224000 2.0kb downstream 2.0kb downstream 5472 true Chr01: 47890086-47895557 Phaseolus vulgaris
Phvul.001G224000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47893558-47895557 Phaseolus vulgaris
Phvul.001G224000 5.0kb upstream 5.0kb upstream 8472 true Chr01: 47885086-47893557 Phaseolus vulgaris
Phvul.001G224000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47885086-47890085 Phaseolus vulgaris
Phvul.001G224000 5.0kb downstream 5.0kb downstream 8472 true Chr01: 47890086-47898557 Phaseolus vulgaris
Phvul.001G224000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47893558-47898557 Phaseolus vulgaris
Phvul.001G224000 10.0kb upstream 10.0kb upstream 13472 true Chr01: 47880086-47893557 Phaseolus vulgaris
Phvul.001G224000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47880086-47890085 Phaseolus vulgaris
Phvul.001G224000 10.0kb downstream 10.0kb downstream 13472 true Chr01: 47890086-47903557 Phaseolus vulgaris
Phvul.001G224000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47893558-47903557 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299453 5265 Fabidae View MSA
124067880 5270 Rosid View MSA
123739903 5271 Pentapetalae View MSA
122788597 5272 Eudicot View MSA
122044691 5273 Angiosperm View MSA
121345479 5274 Embryophyte View MSA
123425164 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.51227 0.0 10.5366    
cufflinks 5.39212 0.0 15.4665   High
cufflinks 4.22455 0.0 12.382    
cufflinks 4.57947 0.0 13.455    
cufflinks 3.73672 0.0 11.1897    
cufflinks 4.08564 0.0 12.0555    
cufflinks 3.98557 0.0 11.8092    
cufflinks 3.96727 0.0 11.7016    
cufflinks 5.87421 0.0 16.7485   High
cufflinks 3.04262 0.0 9.31047   Low
cufflinks 4.44541 0.0 13.0833    

0 Strain