Gene : Phvul.001G223200 P. vulgaris v2.1
Defline:  (1 of 2) 3.4.19.3 - Pyroglutamyl-peptidase I / Pyrrolidone-carboxylate peptidase Genomic Order:  2214
Name:  ? Phvul.001G223200 Secondary Identifier:  ? PAC:37169008
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G223200 0.5kb upstream 0.5kb upstream 3650 true Chr01: 47833583-47837232 Phaseolus vulgaris
Phvul.001G223200 0.5kb upstream 0.5kb upstream 500 false Chr01: 47836733-47837232 Phaseolus vulgaris
Phvul.001G223200 0.5kb downstream 0.5kb downstream 3650 true Chr01: 47833083-47836732 Phaseolus vulgaris
Phvul.001G223200 0.5kb downstream 0.5kb downstream 500 false Chr01: 47833083-47833582 Phaseolus vulgaris
Phvul.001G223200 1.0kb upstream 1.0kb upstream 4150 true Chr01: 47833583-47837732 Phaseolus vulgaris
Phvul.001G223200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47836733-47837732 Phaseolus vulgaris
Phvul.001G223200 1.0kb downstream 1.0kb downstream 4150 true Chr01: 47832583-47836732 Phaseolus vulgaris
Phvul.001G223200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47832583-47833582 Phaseolus vulgaris
Phvul.001G223200 2.0kb upstream 2.0kb upstream 5150 true Chr01: 47833583-47838732 Phaseolus vulgaris
Phvul.001G223200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47836733-47838732 Phaseolus vulgaris
Phvul.001G223200 2.0kb downstream 2.0kb downstream 5150 true Chr01: 47831583-47836732 Phaseolus vulgaris
Phvul.001G223200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47831583-47833582 Phaseolus vulgaris
Phvul.001G223200 5.0kb upstream 5.0kb upstream 8150 true Chr01: 47833583-47841732 Phaseolus vulgaris
Phvul.001G223200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47836733-47841732 Phaseolus vulgaris
Phvul.001G223200 5.0kb downstream 5.0kb downstream 8150 true Chr01: 47828583-47836732 Phaseolus vulgaris
Phvul.001G223200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47828583-47833582 Phaseolus vulgaris
Phvul.001G223200 10.0kb upstream 10.0kb upstream 13150 true Chr01: 47833583-47846732 Phaseolus vulgaris
Phvul.001G223200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47836733-47846732 Phaseolus vulgaris
Phvul.001G223200 10.0kb downstream 10.0kb downstream 13150 true Chr01: 47823583-47836732 Phaseolus vulgaris
Phvul.001G223200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47823583-47833582 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026217 5273 Angiosperm View MSA
122311801 5265 Fabidae View MSA
124062104 5270 Rosid View MSA
123741081 5271 Pentapetalae View MSA
122790399 5272 Eudicot View MSA
121348835 5274 Embryophyte View MSA
123428644 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.7922 0.0 80.2314   High
cufflinks 15.7523 0.0 42.9863    
cufflinks 13.712 0.0 37.809   Low
cufflinks 30.9661 0.0 80.8784   High
cufflinks 19.1527 0.0 51.6626    
cufflinks 13.9082 0.0 38.3455   Low
cufflinks 21.7358 0.0 57.7506    
cufflinks 21.2885 0.0 56.4256    
cufflinks 26.1708 0.0 68.8786    
cufflinks 17.5651 0.0 47.5801    
cufflinks 26.7196 0.0 70.3586    

0 Strain