Gene : Phvul.001G212600 P. vulgaris v2.1
Defline:  (1 of 1) K02210 - DNA replication licensing factor MCM7 (MCM7, CDC47) Genomic Order:  2108
Name:  ? Phvul.001G212600 Secondary Identifier:  ? PAC:37169933
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G212600 0.5kb upstream 0.5kb upstream 5620 true Chr01: 46887345-46892964 Phaseolus vulgaris
Phvul.001G212600 0.5kb upstream 0.5kb upstream 500 false Chr01: 46892465-46892964 Phaseolus vulgaris
Phvul.001G212600 0.5kb downstream 0.5kb downstream 5620 true Chr01: 46886845-46892464 Phaseolus vulgaris
Phvul.001G212600 0.5kb downstream 0.5kb downstream 500 false Chr01: 46886845-46887344 Phaseolus vulgaris
Phvul.001G212600 1.0kb upstream 1.0kb upstream 6120 true Chr01: 46887345-46893464 Phaseolus vulgaris
Phvul.001G212600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46892465-46893464 Phaseolus vulgaris
Phvul.001G212600 1.0kb downstream 1.0kb downstream 6120 true Chr01: 46886345-46892464 Phaseolus vulgaris
Phvul.001G212600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46886345-46887344 Phaseolus vulgaris
Phvul.001G212600 2.0kb upstream 2.0kb upstream 7120 true Chr01: 46887345-46894464 Phaseolus vulgaris
Phvul.001G212600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46892465-46894464 Phaseolus vulgaris
Phvul.001G212600 2.0kb downstream 2.0kb downstream 7120 true Chr01: 46885345-46892464 Phaseolus vulgaris
Phvul.001G212600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46885345-46887344 Phaseolus vulgaris
Phvul.001G212600 5.0kb upstream 5.0kb upstream 10120 true Chr01: 46887345-46897464 Phaseolus vulgaris
Phvul.001G212600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46892465-46897464 Phaseolus vulgaris
Phvul.001G212600 5.0kb downstream 5.0kb downstream 10120 true Chr01: 46882345-46892464 Phaseolus vulgaris
Phvul.001G212600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46882345-46887344 Phaseolus vulgaris
Phvul.001G212600 10.0kb upstream 10.0kb upstream 15120 true Chr01: 46887345-46902464 Phaseolus vulgaris
Phvul.001G212600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46892465-46902464 Phaseolus vulgaris
Phvul.001G212600 10.0kb downstream 10.0kb downstream 15120 true Chr01: 46877345-46892464 Phaseolus vulgaris
Phvul.001G212600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46877345-46887344 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306455 5265 Fabidae View MSA
124066102 5270 Rosid View MSA
123742123 5271 Pentapetalae View MSA
122787462 5272 Eudicot View MSA
122044774 5273 Angiosperm View MSA
121348758 5274 Embryophyte View MSA
123425028 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.59576 0.0 20.213    
cufflinks 18.4195 0.0 47.6319    
cufflinks 4.41537 0.0 12.283    
cufflinks 5.99076 0.0 16.3082    
cufflinks 8.44284 0.0 22.3995    
cufflinks 14.5072 0.0 37.5292    
cufflinks 13.93 0.0 36.0566    
cufflinks 15.4124 0.0 39.8436    
cufflinks 13.8199 0.0 35.7815    
cufflinks 0.999914 0.0 3.27748   Low
cufflinks 9.57633 0.0 25.1753    

0 Strain