Gene : Phvul.001G213200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32285:SF19 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 6 Genomic Order:  2114
Name:  ? Phvul.001G213200 Secondary Identifier:  ? PAC:37168201
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G213200 0.5kb upstream 0.5kb upstream 3105 true Chr01: 46948356-46951460 Phaseolus vulgaris
Phvul.001G213200 0.5kb upstream 0.5kb upstream 500 false Chr01: 46948356-46948855 Phaseolus vulgaris
Phvul.001G213200 0.5kb downstream 0.5kb downstream 3105 true Chr01: 46948856-46951960 Phaseolus vulgaris
Phvul.001G213200 0.5kb downstream 0.5kb downstream 500 false Chr01: 46951461-46951960 Phaseolus vulgaris
Phvul.001G213200 1.0kb upstream 1.0kb upstream 3605 true Chr01: 46947856-46951460 Phaseolus vulgaris
Phvul.001G213200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46947856-46948855 Phaseolus vulgaris
Phvul.001G213200 1.0kb downstream 1.0kb downstream 3605 true Chr01: 46948856-46952460 Phaseolus vulgaris
Phvul.001G213200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46951461-46952460 Phaseolus vulgaris
Phvul.001G213200 2.0kb upstream 2.0kb upstream 4605 true Chr01: 46946856-46951460 Phaseolus vulgaris
Phvul.001G213200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46946856-46948855 Phaseolus vulgaris
Phvul.001G213200 2.0kb downstream 2.0kb downstream 4605 true Chr01: 46948856-46953460 Phaseolus vulgaris
Phvul.001G213200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46951461-46953460 Phaseolus vulgaris
Phvul.001G213200 5.0kb upstream 5.0kb upstream 7605 true Chr01: 46943856-46951460 Phaseolus vulgaris
Phvul.001G213200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46943856-46948855 Phaseolus vulgaris
Phvul.001G213200 5.0kb downstream 5.0kb downstream 7605 true Chr01: 46948856-46956460 Phaseolus vulgaris
Phvul.001G213200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46951461-46956460 Phaseolus vulgaris
Phvul.001G213200 10.0kb upstream 10.0kb upstream 12605 true Chr01: 46938856-46951460 Phaseolus vulgaris
Phvul.001G213200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46938856-46948855 Phaseolus vulgaris
Phvul.001G213200 10.0kb downstream 10.0kb downstream 12605 true Chr01: 46948856-46961460 Phaseolus vulgaris
Phvul.001G213200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46951461-46961460 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308792 5265 Fabidae View MSA
124064273 5270 Rosid View MSA
123746604 5271 Pentapetalae View MSA
122785622 5272 Eudicot View MSA
122043944 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.38195 0.0 10.0095   Low
cufflinks 5.60228 0.0 15.7873    
cufflinks 2.91374 0.0 8.79228   Low
cufflinks 4.88487 0.0 14.0608    
cufflinks 6.33473 0.0 17.7639    
cufflinks 5.06616 0.0 14.4033    
cufflinks 8.48083 0.0 23.0082    
cufflinks 10.1297 0.0 27.0047   High
cufflinks 11.0796 0.0 29.4903   High
cufflinks 5.27576 0.0 14.9699    
cufflinks 5.43436 0.0 15.4237    

0 Strain