Gene : Phvul.001G214200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23303 - CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING Genomic Order:  2124
Name:  ? Phvul.001G214200 Secondary Identifier:  ? PAC:37168288
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G214200 0.5kb upstream 0.5kb upstream 17260 true Chr01: 47015617-47032876 Phaseolus vulgaris
Phvul.001G214200 0.5kb upstream 0.5kb upstream 500 false Chr01: 47015617-47016116 Phaseolus vulgaris
Phvul.001G214200 0.5kb downstream 0.5kb downstream 17260 true Chr01: 47016117-47033376 Phaseolus vulgaris
Phvul.001G214200 0.5kb downstream 0.5kb downstream 500 false Chr01: 47032877-47033376 Phaseolus vulgaris
Phvul.001G214200 1.0kb upstream 1.0kb upstream 17760 true Chr01: 47015117-47032876 Phaseolus vulgaris
Phvul.001G214200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47015117-47016116 Phaseolus vulgaris
Phvul.001G214200 1.0kb downstream 1.0kb downstream 17760 true Chr01: 47016117-47033876 Phaseolus vulgaris
Phvul.001G214200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47032877-47033876 Phaseolus vulgaris
Phvul.001G214200 2.0kb upstream 2.0kb upstream 18760 true Chr01: 47014117-47032876 Phaseolus vulgaris
Phvul.001G214200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47014117-47016116 Phaseolus vulgaris
Phvul.001G214200 2.0kb downstream 2.0kb downstream 18760 true Chr01: 47016117-47034876 Phaseolus vulgaris
Phvul.001G214200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47032877-47034876 Phaseolus vulgaris
Phvul.001G214200 5.0kb upstream 5.0kb upstream 21760 true Chr01: 47011117-47032876 Phaseolus vulgaris
Phvul.001G214200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47011117-47016116 Phaseolus vulgaris
Phvul.001G214200 5.0kb downstream 5.0kb downstream 21760 true Chr01: 47016117-47037876 Phaseolus vulgaris
Phvul.001G214200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47032877-47037876 Phaseolus vulgaris
Phvul.001G214200 10.0kb upstream 10.0kb upstream 26760 true Chr01: 47006117-47032876 Phaseolus vulgaris
Phvul.001G214200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47006117-47016116 Phaseolus vulgaris
Phvul.001G214200 10.0kb downstream 10.0kb downstream 26760 true Chr01: 47016117-47042876 Phaseolus vulgaris
Phvul.001G214200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47032877-47042876 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299388 5265 Fabidae View MSA
124064974 5270 Rosid View MSA
123737626 5271 Pentapetalae View MSA
122788154 5272 Eudicot View MSA
122048074 5273 Angiosperm View MSA
121346415 5274 Embryophyte View MSA
123380379 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.85469 0.0 12.9338   Low
cufflinks 22.6904 0.0 60.0414    
cufflinks 19.8962 0.0 52.3297    
cufflinks 11.1354 0.0 28.7955    
cufflinks 14.9645 0.0 38.7683    
cufflinks 19.6158 0.0 51.4669    
cufflinks 20.0335 0.0 52.5863    
cufflinks 23.505 0.0 62.5958    
cufflinks 26.9544 0.0 72.0329    
cufflinks 26.7241 0.0 71.6024    
cufflinks 14.1971 0.0 36.7516    

0 Strain