Gene : Phvul.001G215400 P. vulgaris v2.1
Defline:  (1 of 6) K07937//K07977 - ADP-ribosylation factor 1 (ARF1) // Arf/Sar family, other (ARF) Genomic Order:  2137
Name:  ? Phvul.001G215400 Secondary Identifier:  ? PAC:37169526
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G215400 0.5kb upstream 0.5kb upstream 2711 true Chr01: 47175971-47178681 Phaseolus vulgaris
Phvul.001G215400 0.5kb upstream 0.5kb upstream 500 false Chr01: 47178182-47178681 Phaseolus vulgaris
Phvul.001G215400 0.5kb downstream 0.5kb downstream 2711 true Chr01: 47175471-47178181 Phaseolus vulgaris
Phvul.001G215400 0.5kb downstream 0.5kb downstream 500 false Chr01: 47175471-47175970 Phaseolus vulgaris
Phvul.001G215400 1.0kb upstream 1.0kb upstream 3211 true Chr01: 47175971-47179181 Phaseolus vulgaris
Phvul.001G215400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47178182-47179181 Phaseolus vulgaris
Phvul.001G215400 1.0kb downstream 1.0kb downstream 3211 true Chr01: 47174971-47178181 Phaseolus vulgaris
Phvul.001G215400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47174971-47175970 Phaseolus vulgaris
Phvul.001G215400 2.0kb upstream 2.0kb upstream 4211 true Chr01: 47175971-47180181 Phaseolus vulgaris
Phvul.001G215400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47178182-47180181 Phaseolus vulgaris
Phvul.001G215400 2.0kb downstream 2.0kb downstream 4211 true Chr01: 47173971-47178181 Phaseolus vulgaris
Phvul.001G215400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47173971-47175970 Phaseolus vulgaris
Phvul.001G215400 5.0kb upstream 5.0kb upstream 7211 true Chr01: 47175971-47183181 Phaseolus vulgaris
Phvul.001G215400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47178182-47183181 Phaseolus vulgaris
Phvul.001G215400 5.0kb downstream 5.0kb downstream 7211 true Chr01: 47170971-47178181 Phaseolus vulgaris
Phvul.001G215400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47170971-47175970 Phaseolus vulgaris
Phvul.001G215400 10.0kb upstream 10.0kb upstream 12211 true Chr01: 47175971-47188181 Phaseolus vulgaris
Phvul.001G215400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47178182-47188181 Phaseolus vulgaris
Phvul.001G215400 10.0kb downstream 10.0kb downstream 12211 true Chr01: 47165971-47178181 Phaseolus vulgaris
Phvul.001G215400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47165971-47175970 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312447 5265 Fabidae View MSA
124074730 5270 Rosid View MSA
123752155 5271 Pentapetalae View MSA
122796047 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.6538 0.0 105.277    
cufflinks 39.3607 0.0 125.008 High  
cufflinks 60.4226 0.0 179.935 High  
cufflinks 76.2085 0.0 243.112 High  
cufflinks 66.289 0.0 211.244 High  
cufflinks 49.6826 0.0 169.243 High  
cufflinks 46.2079 0.0 146.466 High  
cufflinks 67.2147 0.0 213.816 High  
cufflinks 49.64 0.0 157.2 High  
cufflinks 16.3834 0.0 51.0742   Low
cufflinks 92.2909 0.0 301.51 High High

0 Strain