Gene : Phvul.001G216000 P. vulgaris v2.1
Defline:  (1 of 3) 1.1.1.145 - 3-beta-hydroxy-Delta(5)-steroid dehydrogenase / Progesterone reductase Genomic Order:  2143
Name:  ? Phvul.001G216000 Secondary Identifier:  ? PAC:37169505
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G216000 0.5kb upstream 0.5kb upstream 2096 true Chr01: 47230832-47232927 Phaseolus vulgaris
Phvul.001G216000 0.5kb upstream 0.5kb upstream 500 false Chr01: 47230832-47231331 Phaseolus vulgaris
Phvul.001G216000 0.5kb downstream 0.5kb downstream 2096 true Chr01: 47231332-47233427 Phaseolus vulgaris
Phvul.001G216000 0.5kb downstream 0.5kb downstream 500 false Chr01: 47232928-47233427 Phaseolus vulgaris
Phvul.001G216000 1.0kb upstream 1.0kb upstream 2596 true Chr01: 47230332-47232927 Phaseolus vulgaris
Phvul.001G216000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47230332-47231331 Phaseolus vulgaris
Phvul.001G216000 1.0kb downstream 1.0kb downstream 2596 true Chr01: 47231332-47233927 Phaseolus vulgaris
Phvul.001G216000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47232928-47233927 Phaseolus vulgaris
Phvul.001G216000 2.0kb upstream 2.0kb upstream 3596 true Chr01: 47229332-47232927 Phaseolus vulgaris
Phvul.001G216000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47229332-47231331 Phaseolus vulgaris
Phvul.001G216000 2.0kb downstream 2.0kb downstream 3596 true Chr01: 47231332-47234927 Phaseolus vulgaris
Phvul.001G216000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47232928-47234927 Phaseolus vulgaris
Phvul.001G216000 5.0kb upstream 5.0kb upstream 6596 true Chr01: 47226332-47232927 Phaseolus vulgaris
Phvul.001G216000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47226332-47231331 Phaseolus vulgaris
Phvul.001G216000 5.0kb downstream 5.0kb downstream 6596 true Chr01: 47231332-47237927 Phaseolus vulgaris
Phvul.001G216000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47232928-47237927 Phaseolus vulgaris
Phvul.001G216000 10.0kb upstream 10.0kb upstream 11596 true Chr01: 47221332-47232927 Phaseolus vulgaris
Phvul.001G216000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47221332-47231331 Phaseolus vulgaris
Phvul.001G216000 10.0kb downstream 10.0kb downstream 11596 true Chr01: 47231332-47242927 Phaseolus vulgaris
Phvul.001G216000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47232928-47242927 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250873 5265 Fabidae Singleton cluster - no MSA
124042023 5270 Rosid View MSA
123749022 5271 Pentapetalae View MSA
122797133 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.8541 0.0 124.727 High  
cufflinks 39.1222 0.0 101.352 High  
cufflinks 7.86424 0.0 22.032    
cufflinks 55.1929 0.0 144.227 High  
cufflinks 11.347 0.0 30.9172    
cufflinks 14.9141 0.0 39.5198    
cufflinks 0.37339 0.0 1.42833 Low Low
cufflinks 0.0353131 0.0 0.165766 Low Low
cufflinks 0.354046 0.0 1.36157 Low Low
cufflinks 1.74619 0.0 5.76699    
cufflinks 28.6969 0.0 74.2223    

0 Strain