Gene : Phvul.001G214900 P. vulgaris v2.1
Defline:  (1 of 1) K11324 - DNA methyltransferase 1-associated protein 1 (DMAP1, SWC4, EAF2) Genomic Order:  2132
Name:  ? Phvul.001G214900 Secondary Identifier:  ? PAC:37170976
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G214900 0.5kb upstream 0.5kb upstream 8019 true Chr01: 47099765-47107783 Phaseolus vulgaris
Phvul.001G214900 0.5kb upstream 0.5kb upstream 500 false Chr01: 47107284-47107783 Phaseolus vulgaris
Phvul.001G214900 0.5kb downstream 0.5kb downstream 8019 true Chr01: 47099265-47107283 Phaseolus vulgaris
Phvul.001G214900 0.5kb downstream 0.5kb downstream 500 false Chr01: 47099265-47099764 Phaseolus vulgaris
Phvul.001G214900 1.0kb upstream 1.0kb upstream 8519 true Chr01: 47099765-47108283 Phaseolus vulgaris
Phvul.001G214900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47107284-47108283 Phaseolus vulgaris
Phvul.001G214900 1.0kb downstream 1.0kb downstream 8519 true Chr01: 47098765-47107283 Phaseolus vulgaris
Phvul.001G214900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47098765-47099764 Phaseolus vulgaris
Phvul.001G214900 2.0kb upstream 2.0kb upstream 9519 true Chr01: 47099765-47109283 Phaseolus vulgaris
Phvul.001G214900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47107284-47109283 Phaseolus vulgaris
Phvul.001G214900 2.0kb downstream 2.0kb downstream 9519 true Chr01: 47097765-47107283 Phaseolus vulgaris
Phvul.001G214900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47097765-47099764 Phaseolus vulgaris
Phvul.001G214900 5.0kb upstream 5.0kb upstream 12519 true Chr01: 47099765-47112283 Phaseolus vulgaris
Phvul.001G214900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47107284-47112283 Phaseolus vulgaris
Phvul.001G214900 5.0kb downstream 5.0kb downstream 12519 true Chr01: 47094765-47107283 Phaseolus vulgaris
Phvul.001G214900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47094765-47099764 Phaseolus vulgaris
Phvul.001G214900 10.0kb upstream 10.0kb upstream 17519 true Chr01: 47099765-47117283 Phaseolus vulgaris
Phvul.001G214900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47107284-47117283 Phaseolus vulgaris
Phvul.001G214900 10.0kb downstream 10.0kb downstream 17519 true Chr01: 47089765-47107283 Phaseolus vulgaris
Phvul.001G214900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47089765-47099764 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301465 5265 Fabidae View MSA
124064017 5270 Rosid View MSA
123739698 5271 Pentapetalae View MSA
122786949 5272 Eudicot View MSA
122041546 5273 Angiosperm View MSA
123429045 5275 Viridiplantae View MSA
121347026 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.31877 0.0 14.9634    
cufflinks 5.64226 0.0 15.8021    
cufflinks 4.89532 0.0 13.8748    
cufflinks 2.94772 0.0 8.89476   Low
cufflinks 5.51896 0.0 15.5625    
cufflinks 5.3651 0.0 15.0843    
cufflinks 6.69285 0.0 18.4646   High
cufflinks 6.39664 0.0 17.6539    
cufflinks 6.01478 0.0 16.7818    
cufflinks 5.30314 0.0 14.9415    
cufflinks 6.06034 0.0 16.9282    

0 Strain