Gene : Phvul.001G215300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11183//PTHR11183:SF54 - GLYCOGENIN // SUBFAMILY NOT NAMED Genomic Order:  2136
Name:  ? Phvul.001G215300 Secondary Identifier:  ? PAC:37168454
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5337 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G215300 0.5kb upstream 0.5kb upstream 2264 true Chr01: 47166433-47168696 Phaseolus vulgaris
Phvul.001G215300 0.5kb upstream 0.5kb upstream 500 false Chr01: 47166433-47166932 Phaseolus vulgaris
Phvul.001G215300 0.5kb downstream 0.5kb downstream 2264 true Chr01: 47166933-47169196 Phaseolus vulgaris
Phvul.001G215300 0.5kb downstream 0.5kb downstream 500 false Chr01: 47168697-47169196 Phaseolus vulgaris
Phvul.001G215300 1.0kb upstream 1.0kb upstream 2764 true Chr01: 47165933-47168696 Phaseolus vulgaris
Phvul.001G215300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47165933-47166932 Phaseolus vulgaris
Phvul.001G215300 1.0kb downstream 1.0kb downstream 2764 true Chr01: 47166933-47169696 Phaseolus vulgaris
Phvul.001G215300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47168697-47169696 Phaseolus vulgaris
Phvul.001G215300 2.0kb upstream 2.0kb upstream 3764 true Chr01: 47164933-47168696 Phaseolus vulgaris
Phvul.001G215300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47164933-47166932 Phaseolus vulgaris
Phvul.001G215300 2.0kb downstream 2.0kb downstream 3764 true Chr01: 47166933-47170696 Phaseolus vulgaris
Phvul.001G215300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47168697-47170696 Phaseolus vulgaris
Phvul.001G215300 5.0kb upstream 5.0kb upstream 6764 true Chr01: 47161933-47168696 Phaseolus vulgaris
Phvul.001G215300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47161933-47166932 Phaseolus vulgaris
Phvul.001G215300 5.0kb downstream 5.0kb downstream 6764 true Chr01: 47166933-47173696 Phaseolus vulgaris
Phvul.001G215300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47168697-47173696 Phaseolus vulgaris
Phvul.001G215300 10.0kb upstream 10.0kb upstream 11764 true Chr01: 47156933-47168696 Phaseolus vulgaris
Phvul.001G215300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47156933-47166932 Phaseolus vulgaris
Phvul.001G215300 10.0kb downstream 10.0kb downstream 11764 true Chr01: 47166933-47178696 Phaseolus vulgaris
Phvul.001G215300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47168697-47178696 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307621 5265 Fabidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.211954 0.0 0.85156 Low Low
cufflinks 0.852526 0.0 4.94442    
cufflinks 3.01959 0.0 12.2665    
cufflinks 0.475552 0.0 2.22491 Low Low
cufflinks 48.4897 0.0 140.978 High High
cufflinks 2.67344 0.0 11.3146    
cufflinks 13.8982 0.0 43.9993    
cufflinks 1.91 0.0 8.79705    
cufflinks 8.51706 0.0 28.9082    
cufflinks 5.0658 0.0 18.6391    
cufflinks 50.3448 0.0 151.321 High High

0 Strain