Gene : Phvul.001G201400 P. vulgaris v2.1
Defline:  (1 of 6) PF00620//PF00786 - RhoGAP domain (RhoGAP) // P21-Rho-binding domain (PBD) Genomic Order:  1996
Name:  ? Phvul.001G201400 Secondary Identifier:  ? PAC:37170957
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G201400 0.5kb upstream 0.5kb upstream 3710 true Chr01: 46018820-46022529 Phaseolus vulgaris
Phvul.001G201400 0.5kb upstream 0.5kb upstream 500 false Chr01: 46018820-46019319 Phaseolus vulgaris
Phvul.001G201400 0.5kb downstream 0.5kb downstream 3710 true Chr01: 46019320-46023029 Phaseolus vulgaris
Phvul.001G201400 0.5kb downstream 0.5kb downstream 500 false Chr01: 46022530-46023029 Phaseolus vulgaris
Phvul.001G201400 1.0kb upstream 1.0kb upstream 4210 true Chr01: 46018320-46022529 Phaseolus vulgaris
Phvul.001G201400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46018320-46019319 Phaseolus vulgaris
Phvul.001G201400 1.0kb downstream 1.0kb downstream 4210 true Chr01: 46019320-46023529 Phaseolus vulgaris
Phvul.001G201400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46022530-46023529 Phaseolus vulgaris
Phvul.001G201400 2.0kb upstream 2.0kb upstream 5210 true Chr01: 46017320-46022529 Phaseolus vulgaris
Phvul.001G201400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46017320-46019319 Phaseolus vulgaris
Phvul.001G201400 2.0kb downstream 2.0kb downstream 5210 true Chr01: 46019320-46024529 Phaseolus vulgaris
Phvul.001G201400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46022530-46024529 Phaseolus vulgaris
Phvul.001G201400 5.0kb upstream 5.0kb upstream 8210 true Chr01: 46014320-46022529 Phaseolus vulgaris
Phvul.001G201400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46014320-46019319 Phaseolus vulgaris
Phvul.001G201400 5.0kb downstream 5.0kb downstream 8210 true Chr01: 46019320-46027529 Phaseolus vulgaris
Phvul.001G201400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46022530-46027529 Phaseolus vulgaris
Phvul.001G201400 10.0kb upstream 10.0kb upstream 13210 true Chr01: 46009320-46022529 Phaseolus vulgaris
Phvul.001G201400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46009320-46019319 Phaseolus vulgaris
Phvul.001G201400 10.0kb downstream 10.0kb downstream 13210 true Chr01: 46019320-46032529 Phaseolus vulgaris
Phvul.001G201400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46022530-46032529 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314458 5265 Fabidae View MSA
124063146 5270 Rosid View MSA
123747483 5271 Pentapetalae View MSA
122789353 5272 Eudicot View MSA
122046059 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.53893 0.0 10.286    
cufflinks 12.4952 0.0 32.7013    
cufflinks 12.4204 0.0 32.4853    
cufflinks 2.67302 0.0 8.07615    
cufflinks 4.58112 0.0 13.027    
cufflinks 23.7343 0.0 61.3915   High
cufflinks 4.49269 0.0 12.7249    
cufflinks 1.96357 0.0 6.0891    
cufflinks 5.29937 0.0 14.8038    
cufflinks 0.512748 0.0 1.84792   Low
cufflinks 5.78377 0.0 16.0685    

0 Strain